ORGLA10G0072500 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA10G0072500 T003956_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.685 0.755
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.685 0.755
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.684 0.776
HRE1
M06595_2.00 		Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN		 Dap-seq
OMalley et al.(2016)
ERF73_col_a 		0.684 0.735
HRE1
M06596_2.00 		Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND		 Dap-seq
OMalley et al.(2016)
ERF73_colamp_a 		0.684 0.735
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.679 0.755
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.679 0.755
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.679 0.755
ERF8
M01608_2.00 		Arabidopsis thaliana
MGCCGNMNNN
NNNKNCGGCK		 PBM
Weirauch et al.(2014)
pTH8095 		0.677 0.735
ERF8
M06586_2.00 		Arabidopsis thaliana
NYHDYCKCCGCCGYH
DRCGGCGGMGRHDRN		 Dap-seq
OMalley et al.(2016)
ERF8_col_a 		0.677 0.735
ERF8
M06587_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN
NHDDYGRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ERF8_colamp_a 		0.677 0.735
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA10G0072500.1 AP2 115 166

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

255 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS10G0390800 Oryza sativa OS10G0390800 I 0.822
OGLUM10G08400 Oryza glumaepatula OGLUM10G08400 I 0.822
OMERI10G05820 Oryza meridionalis OMERI10G05820 I 0.822
BGIOSGA032849 Oryza indica BGIOSGA032849 I 0.822
ONIVA10G08250 Oryza nivara ONIVA10G08250 I 0.822
ORUFI10G09060 Oryza rufipogon ORUFI10G09060 I 0.822
Pavir.Ib02796 Panicum virgatum Pavir.Ib02796 I 0.766
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.721
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.721
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.721
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.721
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.721
Si002845m.g Setaria italica Si002845m.g I 0.721
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.721
OS01G0313300 Oryza sativa OS01G0313300 I 0.721
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.721
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.721
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.721
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.721
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.721
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.721
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.721
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.716
PGSC0003DMG400028853 Solanum tuberosum PGSC0003DMG400028853 I 0.715
Solyc12g049560.1 Solanum lycopersicum Solyc12g049560.1 I 0.715
LPERR03G05410 Leersia perrieri LPERR03G05410 N 0.714
Sb07g006200 Sorghum bicolor Sb07g006200 I 0.713
Sb07g006210 Sorghum bicolor Sb07g006210 I 0.713
Sb07g006195 Sorghum bicolor Sb07g006195 I 0.713
Sb07g006190 Sorghum bicolor Sb07g006190 I 0.713
GRMZM2G020054 Zea mays GRMZM2G020054 I 0.713
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.713
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.713
GRMZM2G089995 Zea mays GRMZM2G089995 I 0.706
Si014469m.g Setaria italica Si014469m.g I 0.706
Gorai.007G280800 Gossypium raimondii Gorai.007G280800 I 0.704
Gorai.007G280900 Gossypium raimondii Gorai.007G280900 I 0.704
Sb04g035160 Sorghum bicolor Sb04g035160 I 0.702
GSMUA_Achr10G31090_001 Musa acuminata GSMUA_Achr10G31090_001 I 0.700
Pavir.J13096 Panicum virgatum Pavir.J13096 I 0.698
GRMZM2G328197 Zea mays GRMZM2G328197 I 0.698
GRMZM2G148333 Zea mays GRMZM2G148333 I 0.697
Si036118m.g Setaria italica Si036118m.g I 0.697
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.696
Pavir.Db02131 Panicum virgatum Pavir.Db02131 I 0.696
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N 0.695
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.695
GRMZM2G429378 Zea mays GRMZM2G429378 I 0.694
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.694
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.694
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.694
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.693
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.693
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.693
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.693
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.693
Bra039658 Brassica rapa Bra039658 I 0.693
TCM_031608 Theobroma cacao TCM_031608 I 0.693
27904.m000217 Ricinus communis 27904.m000217 I 0.693
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.693
Cagra.1013s0062 Capsella grandiflora Cagra.1013s0062 I 0.692
Thhalv10018945m.g Eutrema salsugineum Thhalv10018945m.g I 0.692
MTR_3g053690 Medicago truncatula MTR_3g053690 I 0.692
Pavir.Fb00951 Panicum virgatum Pavir.Fb00951 I 0.692
Carubv10020812m.g Capsella rubella Carubv10020812m.g I 0.692
Bostr.10273s0115 Boechera stricta Bostr.10273s0115 I 0.692
Ca_20544 Cicer arietinum Ca_20544 I 0.692
Pavir.Fa01728 Panicum virgatum Pavir.Fa01728 I 0.692
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.691
Ca_22534 Cicer arietinum Ca_22534 I 0.691
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.691
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.691
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.690
Aquca_076_00008 Aquilegia coerulea Aquca_076_00008 I 0.690
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.690
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.690
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.689
Cucsa.122930 Cucumis sativus Cucsa.122930 I 0.689
Sb02g042760 Sorghum bicolor Sb02g042760 I 0.689
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.689
Aquca_023_00168 Aquilegia coerulea Aquca_023_00168 I 0.689
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.688
AMTR_s00017p00232330 Amborella trichopoda AMTR_s00017p00232330 I 0.688
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.688
orange1.1g020391m.g Citrus sinensis orange1.1g020391m.g I 0.688
Bra001588 Brassica rapa Bra001588 I 0.688
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.688
Bo3g066710 Brassica oleracea Bo3g066710 I 0.688
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.688
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.688
cassava42230.valid.m1 Manihot esculenta cassava42230.valid.m1 I 0.688
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.688
Ciclev10025816m.g Citrus clementina Ciclev10025816m.g I 0.688
Bra021594 Brassica rapa Bra021594 I 0.688
cassava42231.valid.m1 Manihot esculenta cassava42231.valid.m1 I 0.688
ONIVA04G27460 Oryza nivara ONIVA04G27460 I 0.687
ORUFI04G30650 Oryza rufipogon ORUFI04G30650 I 0.687
Thhalv10011796m.g Eutrema salsugineum Thhalv10011796m.g I 0.687
OS04G0669200 Oryza sativa OS04G0669200 I 0.687
OGLUM04G28860 Oryza glumaepatula OGLUM04G28860 I 0.687
Bra030957 Brassica rapa Bra030957 I 0.687
OMERI04G24480 Oryza meridionalis OMERI04G24480 I 0.687
BGIOSGA014134 Oryza indica BGIOSGA014134 I 0.687
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.686
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.686
Bo1g129710 Brassica oleracea Bo1g129710 I 0.686
OS07G0674800 Oryza sativa OS07G0674800 N 0.686
Si023330m.g Setaria italica Si023330m.g I 0.686
OBART07G26160 Oryza barthii OBART07G26160 N 0.686
Si031079m.g Setaria italica Si031079m.g I 0.686
GSMUA_Achr10G19950_001 Musa acuminata GSMUA_Achr10G19950_001 I 0.686
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.686
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.686
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.686
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.686
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.686
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.686
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.686
Pavir.Ga00187 Panicum virgatum Pavir.Ga00187 I 0.686
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.686
Pavir.Gb00092 Panicum virgatum Pavir.Gb00092 I 0.686
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.685
RAP2-12 Arabidopsis thaliana AT1G53910 D 0.685
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.685
GRMZM2G018984 Zea mays GRMZM2G018984 I 0.685
GSMUA_Achr6G18020_001 Musa acuminata GSMUA_Achr6G18020_001 I 0.685
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.685
Cagra.0769s0008 Capsella grandiflora Cagra.0769s0008 I 0.685
RAP2.12 Arabidopsis lyrata scaffold_105235.1 I 0.685
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.685
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.685
Bostr.7128s0090 Boechera stricta Bostr.7128s0090 I 0.685
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.685
Carubv10009538m.g Capsella rubella Carubv10009538m.g I 0.685
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.685
Thhalv10011606m.g Eutrema salsugineum Thhalv10011606m.g I 0.685
Si030514m.g Setaria italica Si030514m.g I 0.684
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.684
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.684
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.684
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.684
ERF091 Arabidopsis thaliana AT4G18450 D 0.684
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.684
HRE1 Arabidopsis thaliana AT1G72360 D 0.684
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.684
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.684
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.684
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.684
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.684
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.684
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.684
OB07G27820 Oryza brachyantha OB07G27820 I 0.684
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.683
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.683
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.683
Si014474m.g Setaria italica Si014474m.g I 0.683
Bra030095 Brassica rapa Bra030095 I 0.683
LjT01F24.60.nd Lotus japonicus LjT01F24.60.nd I 0.683
chr1.CM0442.200.nd Lotus japonicus chr1.CM0442.200.nd I 0.683
Bo7g048170 Brassica oleracea Bo7g048170 I 0.683
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.682
OS03G0341000 Oryza sativa OS03G0341000 N 0.682
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.682
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.682
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.682
Bo3g074840 Brassica oleracea Bo3g074840 I 0.682
Bra001784 Brassica rapa Bra001784 I 0.682
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.682
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.682
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.682
MLOC_38561 Hordeum vulgare MLOC_38561 I 0.682
F775_30714 Aegilops tauschii F775_30714 I 0.682
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.682
Pm011391 Prunus mume Pm011391 I 0.682
Traes_5AL_14D9A9844 Triticum aestivum Traes_5AL_14D9A9844 I 0.682
GSMUA_Achr9G05260_001 Musa acuminata GSMUA_Achr9G05260_001 I 0.682
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.682
Si036615m.g Setaria italica Si036615m.g I 0.682
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.682
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.682
Traes_5BL_7F84602F3 Triticum aestivum Traes_5BL_7F84602F3 I 0.682
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.682
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.682
Traes_5DL_26F3B188A Triticum aestivum Traes_5DL_26F3B188A I 0.682
TRIUR3_20682 Triticum urartu TRIUR3_20682 I 0.682
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.682
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.681
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.681
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.681
mgf010035m Mimulus guttatus mgf010035m I 0.681
Bra036016 Brassica rapa Bra036016 I 0.681
GLYMA15G16260 Glycine max GLYMA15G16260 I 0.681
Bo2g122260 Brassica oleracea Bo2g122260 I 0.681
Bo3g184310 Brassica oleracea Bo3g184310 I 0.681
mgf009667m Mimulus guttatus mgf009667m I 0.681
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.680
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.680
POPTR_0005s24470 Populus trichocarpa POPTR_0005s24470 I 0.680
GRMZM2G114820 Zea mays GRMZM2G114820 I 0.680
Cucsa.101370 Cucumis sativus Cucsa.101370 I 0.680
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.680
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.680
SapurV1A.0207s0200 Salix purpurea SapurV1A.0207s0200 I 0.679
Pavir.Bb02257 Panicum virgatum Pavir.Bb02257 I 0.679
ERF4 Arabidopsis thaliana AT3G15210 D 0.679
BGIOSGA030816 Oryza indica BGIOSGA030816 I 0.679
Pavir.J17283 Panicum virgatum Pavir.J17283 I 0.679
PDK_20s1440861g004 Phoenix dactylifera PDK_20s1440861g004 I 0.679
ONIVA09G11170 Oryza nivara ONIVA09G11170 I 0.679
Pavir.J01991 Panicum virgatum Pavir.J01991 I 0.679
OMERI09G08870 Oryza meridionalis OMERI09G08870 I 0.679
Pavir.Fb01507 Panicum virgatum Pavir.Fb01507 I 0.679
ORGLA09G0085500 Oryza glaberrima ORGLA09G0085500 I 0.679
OPUNC09G09870 Oryza punctata OPUNC09G09870 I 0.679
Carubv10011371m.g Capsella rubella Carubv10011371m.g I 0.679
Si030088m.g Setaria italica Si030088m.g I 0.679
Cagra.0897s0005 Capsella grandiflora Cagra.0897s0005 I 0.679
OGLUM09G11780 Oryza glumaepatula OGLUM09G11780 I 0.679
OS09G0434500 Oryza sativa OS09G0434500 I 0.679
Sb02g025530 Sorghum bicolor Sb02g025530 I 0.679
GRMZM2G125460 Zea mays GRMZM2G125460 N 0.679
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.679
LPERR09G08060 Leersia perrieri LPERR09G08060 I 0.679
OBART09G11390 Oryza barthii OBART09G11390 I 0.679
ATERF-8 Arabidopsis lyrata fgenesh2_kg.1__4394__AT1G53170.1 I 0.679
ATERF-4 Arabidopsis lyrata scaffold_301765.1 I 0.679
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.679
ORUFI09G12180 Oryza rufipogon ORUFI09G12180 I 0.679
OB09G17960 Oryza brachyantha OB09G17960 I 0.679
BRADI4G31040 Brachypodium distachyon BRADI4G31040 I 0.679
OLONG_007389 Oryza longistaminata OLONG_007389 I 0.679
GRMZM2G175525 Zea mays GRMZM2G175525 I 0.678
Pavir.J34139 Panicum virgatum Pavir.J34139 I 0.678
OGLUM03G06060 Oryza glumaepatula OGLUM03G06060 I 0.678
LPERR03G05400 Leersia perrieri LPERR03G05400 I 0.678
OBART03G06060 Oryza barthii OBART03G06060 I 0.678
Pavir.J26885 Panicum virgatum Pavir.J26885 I 0.678
ONIVA03G06080 Oryza nivara ONIVA03G06080 I 0.678
GSMUA_Achr11G15810_001 Musa acuminata GSMUA_Achr11G15810_001 I 0.678
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.678
ORGLA03G0058500 Oryza glaberrima ORGLA03G0058500 I 0.678
OMERI03G05890 Oryza meridionalis OMERI03G05890 I 0.678
ORUFI03G05890 Oryza rufipogon ORUFI03G05890 I 0.678
MDP0000324718 Malus domestica MDP0000324718 I 0.678
Pavir.Ib00526 Panicum virgatum Pavir.Ib00526 I 0.678
OS03G0183000 Oryza sativa OS03G0183000 I 0.678
BGIOSGA011328 Oryza indica BGIOSGA011328 I 0.678
GRMZM2G050851 Zea mays GRMZM2G050851 I 0.678
Bra027270 Brassica rapa Bra027270 I 0.677
Cla023722 Citrullus lanatus Cla023722 I 0.677
Bo5g127380 Brassica oleracea Bo5g127380 I 0.677
Carubv10010374m.g Capsella rubella Carubv10010374m.g I 0.677
GRMZM2G151542 Zea mays GRMZM2G151542 I 0.677
Cagra.1472s0014 Capsella grandiflora Cagra.1472s0014 I 0.677
ERF8 Arabidopsis thaliana AT1G53170 D 0.677