ORGLA12G0200400 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA12G0200400 T003965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.796 0.863
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.796 0.863
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA12G0200400.1 AP2 70 121

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.000
Pm005577 Prunus mume Pm005577 I 0.000
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.000
Pm027048 Prunus mume Pm027048 I 0.000
Pm029185 Prunus mume Pm029185 I 0.000
28226.m000839 Ricinus communis 28226.m000839 I 0.000
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.000
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.000
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.000
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.000
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.000
Pm005573 Prunus mume Pm005573 I 0.000
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.000
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.000
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.000
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.000
VIT_01s0011g04760 Vitis vinifera VIT_01s0011g04760 I 0.000
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.000
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.000
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.000
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.000
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.000
VIT_17s0000g02660 Vitis vinifera VIT_17s0000g02660 I 0.000
MDP0000887107 Malus domestica MDP0000887107 I 0.000
MDP0000261265 Malus domestica MDP0000261265 I 0.000
MDP0000250597 Malus domestica MDP0000250597 I 0.000
MDP0000133817 Malus domestica MDP0000133817 I 0.000
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.000
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.000
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.000
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.000
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.000
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.000
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.000
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.000
Gorai.002G180300 Gossypium raimondii Gorai.002G180300 I 0.000
MDP0000140609 Malus domestica MDP0000140609 I 0.000
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.000
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.000
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.000
MDP0000143276 Malus domestica MDP0000143276 I 0.000
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.000
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.000
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.000
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.000
Eucgr.B02896 Eucalyptus grandis Eucgr.B02896 I 0.000
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.000
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.000
Gorai.007G179300 Gossypium raimondii Gorai.007G179300 I 0.000
TCM_037559 Theobroma cacao TCM_037559 I 0.000
AMTR_s00005p00268890 Amborella trichopoda AMTR_s00005p00268890 I 0.000
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.000
GSMUA_Achr3G21000_001 Musa acuminata GSMUA_Achr3G21000_001 I 0.000
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.000
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.000
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.000
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.000
F775_19148 Aegilops tauschii F775_19148 I 0.000
PGSC0003DMG400030548 Solanum tuberosum PGSC0003DMG400030548 I 0.000
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.000
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.000
GLYMA20G01610 Glycine max GLYMA20G01610 I 0.000
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.000
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.000
F775_17212 Aegilops tauschii F775_17212 I 0.000
F775_42516 Aegilops tauschii F775_42516 I 0.000
PK11717.1 Cannabis sativa PK11717.1 I 0.000
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.000
GLYMA07G33960 Glycine max GLYMA07G33960 I 0.000
PK05970.1 Cannabis sativa PK05970.1 I 0.000
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.000
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.000
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.000
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.000
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.000
SapurV1A.0163s0150 Salix purpurea SapurV1A.0163s0150 I 0.000
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.000
Si004316m.g Setaria italica Si004316m.g I 0.000
Si038905m.g Setaria italica Si038905m.g I 0.000
Solyc05g008250.1 Solanum lycopersicum Solyc05g008250.1 I 0.000
TCM_010839 Theobroma cacao TCM_010839 I 0.000
TCM_015933 Theobroma cacao TCM_015933 I 0.000
TCM_029121 Theobroma cacao TCM_029121 I 0.000
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.000
TCM_037379 Theobroma cacao TCM_037379 I 0.000
TCM_037383 Theobroma cacao TCM_037383 I 0.000
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.000
POPTR_0008s12750 Populus trichocarpa POPTR_0008s12750 I 0.000
POPTR_0010s12420 Populus trichocarpa POPTR_0010s12420 I 0.000
PRUPE_ppa010846mg Prunus persica PRUPE_ppa010846mg I 0.000
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.000
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.000
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.000
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.000
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.000
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.000
MDP0000931057 Malus domestica MDP0000931057 N 0.000
MDP0000253904 Malus domestica MDP0000253904 N 0.000
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.000
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.000
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.000
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.000
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.000
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.000
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.000
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.000
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.000
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.000
MDP0000226215 Malus domestica MDP0000226215 N 0.000
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.000
Pm013277 Prunus mume Pm013277 N 0.000
Cla012784 Citrullus lanatus Cla012784 N 0.000
Ca_12762 Cicer arietinum Ca_12762 N 0.000
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.000
TCM_029126 Theobroma cacao TCM_029126 N 0.000
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.000
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.000
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.000
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.000
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.000
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.000
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.000
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.000
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.000
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.000
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.000
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.000
Pm023419 Prunus mume Pm023419 N 0.000
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.000
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.000
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.000
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.000
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.000
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.000
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.000
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.000
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.000
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.000
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.000
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.000
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.000
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.000
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.000
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.000
mgf024953m Mimulus guttatus mgf024953m N 0.000
mgf018735m Mimulus guttatus mgf018735m N 0.000
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.000
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.000