ORUFI04G29120 (Oryza rufipogon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORUFI04G29120 T004034_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.859 0.980
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.764 0.822
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.763 0.832
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.753 0.792
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G29120.1 AP2 161 210
ORUFI04G29120.1 AP2 253 304
ORUFI04G29120.2 AP2 161 210
ORUFI04G29120.2 AP2 253 304
ORUFI04G29120.3 AP2 161 210
ORUFI04G29120.3 AP2 253 337
ORUFI04G29120.4 AP2 161 210
ORUFI04G29120.4 AP2 253 337
ORUFI04G29120.5 AP2 161 204
ORUFI04G29120.5 AP2 234 285
ORUFI04G29120.6 AP2 161 204
ORUFI04G29120.6 AP2 234 285
ORUFI04G29120.7 AP2 161 204
ORUFI04G29120.7 AP2 234 318

Links

Other AP2 family TFs
Other Oryza rufipogon TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.881
Si012635m.g Setaria italica Si012635m.g I 0.869
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.869
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.869
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.869
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.869
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.869
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.869
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.869
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.868
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.861
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.861
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.861
TCM_000665 Theobroma cacao TCM_000665 I 0.861
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.859
Bra011741 Brassica rapa Bra011741 I 0.859
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.859
AP2 Arabidopsis thaliana AT4G36920 I 0.859
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.859
Ca_09295 Cicer arietinum Ca_09295 I 0.859
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.859
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.859
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.859
Bo1g004960 Brassica oleracea Bo1g004960 I 0.859
Bo7g118400 Brassica oleracea Bo7g118400 I 0.859
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.859
Bra017809 Brassica rapa Bra017809 I 0.859
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.859
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.858
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.858
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.858
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.858
PK02403.1 Cannabis sativa PK02403.1 I 0.858
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.858
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.858
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.858
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.858
Cla000716 Citrullus lanatus Cla000716 I 0.858
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.858
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.858
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.858
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.858
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.858
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.858
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.858
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.857
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.857
mgf009315m Mimulus guttatus mgf009315m I 0.857
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.856
29805.m001494 Ricinus communis 29805.m001494 I 0.856
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.855
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.851
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.850
28752.m000339 Ricinus communis 28752.m000339 I 0.850
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.850
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.850
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.850
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.850
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.850
Si025305m.g Setaria italica Si025305m.g I 0.850
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.850
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.850
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.850
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.850
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.850
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.850
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.850
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.850
OS05G0121600 Oryza sativa OS05G0121600 I 0.850
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.850
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.850
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.850
Ca_02499 Cicer arietinum Ca_02499 I 0.850
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.850
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.850
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.850
Pm002492 Prunus mume Pm002492 I 0.849
TCM_022077 Theobroma cacao TCM_022077 I 0.849
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.849
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.849
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.849
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.849
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.849
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.849
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.849
MDP0000200319 Malus domestica MDP0000200319 I 0.849
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.849
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.849
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.848
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.848
TCM_042000 Theobroma cacao TCM_042000 I 0.848
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.848
F775_32962 Aegilops tauschii F775_32962 I 0.848
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.848
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.848
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.848
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.848
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.847
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.847
29169.m000017 Ricinus communis 29169.m000017 I 0.847
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.847
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.847
mgf021945m Mimulus guttatus mgf021945m I 0.847
PK07183.1 Cannabis sativa PK07183.1 I 0.847
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.846
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.845
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.845
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.845
MDP0000181606 Malus domestica MDP0000181606 I 0.845
Pm000974 Prunus mume Pm000974 I 0.845
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.845
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.844
Cla018124 Citrullus lanatus Cla018124 I 0.844
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.844
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.843
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.843
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.842
MDP0000137561 Malus domestica MDP0000137561 I 0.842
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.841
Pm030172 Prunus mume Pm030172 I 0.841
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.841
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.841
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.840
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.839
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.839
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.839
OB06G29960 Oryza brachyantha OB06G29960 I 0.839
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.839
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.839
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.839
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.839
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.839
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.839
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.839
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.839
Ca_14618 Cicer arietinum Ca_14618 I 0.838
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.838
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.838
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.835
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.833
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.833
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.832
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.832
Ca_12010 Cicer arietinum Ca_12010 I 0.832
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.831
OBART07G08110 Oryza barthii OBART07G08110 I 0.831
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.831
OB03G45870 Oryza brachyantha OB03G45870 I 0.831
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.831
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.831
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.831
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.831
OS07G0235800 Oryza sativa OS07G0235800 I 0.831
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.831
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.831
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.831
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.831
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.831
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.829
Si029636m.g Setaria italica Si029636m.g I 0.829
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.829
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.829
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.829
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.829
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.829
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.828
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.828
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.828
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.828
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.828
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.828
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.828
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.828
Si036068m.g Setaria italica Si036068m.g I 0.828
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.828
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.828
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.828
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.828
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.827
Bo4g070350 Brassica oleracea Bo4g070350 I 0.827
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.827
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.827
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.827
Bra011939 Brassica rapa Bra011939 I 0.827
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.827
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.826
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.826
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.825
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.825
mgf005133m Mimulus guttatus mgf005133m I 0.823
mgf010466m Mimulus guttatus mgf010466m I 0.823
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.822
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.822
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.821
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.820
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.820
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.820
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.818
P93632_MAIZE Zea mays P93632_MAIZE D 0.818
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.818
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.818
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.818
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.817
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.813
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.811
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.811
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.810
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.809
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.809
MDP0000163645 Malus domestica MDP0000163645 I 0.809
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.808
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.808
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.807
TOE3 Arabidopsis thaliana AT5G67180 I 0.807
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.807
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.807
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.807
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.807
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.807
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.807
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.805
Bo7g064000 Brassica oleracea Bo7g064000 I 0.804
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.804
Bra012139 Brassica rapa Bra012139 I 0.804
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.800
OS03G0818800 Oryza sativa OS03G0818800 I 0.796
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.795
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.794
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.789
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.787
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.787
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.785
Cla020549 Citrullus lanatus Cla020549 I 0.783
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.771
Cla018549 Citrullus lanatus Cla018549 I 0.766
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.715
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.714
Si006371m.g Setaria italica Si006371m.g I 0.706
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689