OS04G0399800 (Oryza sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OS04G0399800 T004168_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LEP
M06661_2.00
Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH

DDNDRHDDHDRCGGCGGMGVN
Dap-seq
OMalley et al.(2016)
LEP_col_a
0.839 0.900
Q84J59_MAIZE
M09717_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BD1_01
0.812 0.840
ERF086
M06663_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYHD

HDRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
PUCHI_col_a
0.804 0.840
ERF086
M06664_2.00
Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN

NNNDHDDHDRCGGCGGMGDHDNNNN
Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a
0.804 0.840
ERF087
M06573_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYYD

HRRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
AT1G28160_col_a
0.788 0.820
ERF087
M06574_2.00
Arabidopsis thaliana
HDYCKCCGCCGYCR

YGRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
AT1G28160_colamp_a
0.788 0.820
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.742 0.780
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.742 0.780
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.742 0.780
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN

NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.730 0.760
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD

HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.730 0.760
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.725 0.740
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.724 0.720
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.724 0.720
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN

NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.722 0.740
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN

NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.703 0.720
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN

NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.703 0.720
HRE1
M06595_2.00
Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN

NDDHDRYGGCGGCGGHKVNDN
Dap-seq
OMalley et al.(2016)
ERF73_col_a
0.700 0.680
HRE1
M06596_2.00
Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY

RYGGCGGCGGHGRNDKHDRND
Dap-seq
OMalley et al.(2016)
ERF73_colamp_a
0.700 0.680
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.699 0.700
ERF8
M01608_2.00
Arabidopsis thaliana
MGCCGNMNNN

NNNKNCGGCK
PBM
Weirauch et al.(2014)
pTH8095
0.699 0.720
ERF8
M06586_2.00
Arabidopsis thaliana
NYHDYCKCCGCCGYH

DRCGGCGGMGRHDRN
Dap-seq
OMalley et al.(2016)
ERF8_col_a
0.699 0.720
ERF8
M06587_2.00
Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN

NHDDYGRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ERF8_colamp_a
0.699 0.720
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.698 0.740
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.691 0.700
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.691 0.700
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.691 0.700
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.683 0.640
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.682 0.620
ERF105
M01632_2.00
Arabidopsis thaliana
CGCCGGCM

KGCCGGCG
PBM
Weirauch et al.(2014)
pTH7233
0.678 0.680
ERF105
M06676_2.00
Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR

YGGCGGCGVHDNNDNNNNNNNNDN
Dap-seq
OMalley et al.(2016)
ERF105_colamp_a
0.678 0.680
ERF105
M06677_2.00
Arabidopsis thaliana
HDSCGCCGCCRYHDH

DHDRYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF105_col
0.678 0.680
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.677 0.660
ERF11
M01606_2.00
Arabidopsis thaliana
NHGCCGNHNN

NNDNCGGCDN
PBM
Weirauch et al.(2014)
pTH8117
0.677 0.700
ERF11
M06575_2.00
Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN

NNNDDYGRCGGCGSHDNNDN
Dap-seq
OMalley et al.(2016)
ERF11_colamp_a
0.677 0.700
ERF11
M06576_2.00
Arabidopsis thaliana
NHNYCKCCGCCGYHD

HDRCGGCGGMGRNDN
Dap-seq
OMalley et al.(2016)
ERF11_col_b
0.677 0.700
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN

NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.677 0.660
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN

NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.677 0.660
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD

HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.677 0.660
ERF1B
M09703_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.677 0.660
ERF1B
M09704_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.677 0.660
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS04T0399800-00 AP2 50 101

Links

Other AP2 family TFs
Other Oryza sativa TFs

1144 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ATOH1 Otolemur garnettii ENSOGAG00000030783 I 0.000
Atoh1 Mus musculus ENSMUSG00000073043 D 0.000
ATOH1 Tupaia belangeri ENSTBEG00000003291 I 0.000
ATOH1 Sus scrofa ENSSSCG00000009196 I 0.000
Atoh1 Rattus norvegicus ENSRNOG00000006383 I 0.000
ATOH1 Pan troglodytes ENSPTRG00000031141 I 0.000
ATOH1 Ochotona princeps ENSOPRG00000008973 I 0.000
ATOH1 Myotis lucifugus ENSMLUG00000008044 I 0.000
ATOH1 Macaca mulatta ENSMMUG00000002367 I 0.000
ATOH1 Monodelphis domestica ENSMODG00000019270 I 0.000
ATOH1 Gorilla gorilla ENSGGOG00000001096 I 0.000
ATOH1 Homo sapiens ENSG00000172238 D 0.000
ATOH1 Echinops telfairi ENSETEG00000019807 I 0.000
ATOH1 Equus caballus ENSECAG00000001213 I 0.000
ATOH1 Dasypus novemcinctus ENSDNOG00000018799 I 0.000
ATOH1 Oryctolagus cuniculus ENSOCUG00000013154 I 0.000
ATOH1 Bos taurus ENSBTAG00000002895 I 0.000
ATOH1 Canis familiaris ENSCAFG00000010016 I 0.000
ATOH1 Callithrix jacchus ENSCJAG00000022028 I 0.000
atoh1a Takifugu rubripes ENSTRUG00000012647 I 0.000
atoh1a Oryzias latipes ENSORLG00000004876 I 0.000
atoh1a Danio rerio ENSDARG00000055294 I 0.000
atoh1a Tetraodon nigroviridis ENSTNIG00000017584 I 0.000
atoh1b Danio rerio ENSDARG00000099564 I 0.000
ENSAMXG00000003022 Astyanax mexicanus ENSAMXG00000003022 I 0.000
ENSBTAP00000003762-D1 Bos grunniens ENSBTAP00000003762-D1 I 0.000
ENSCSAG00000000408 Chlorocebus sabaeus ENSCSAG00000000408 I 0.000
ENSGMOG00000019019 Gadus morhua ENSGMOG00000019019 I 0.000
ENSLACG00000005491 Latimeria chalumnae ENSLACG00000005491 I 0.000
ENSLACG00000013212 Latimeria chalumnae ENSLACG00000013212 I 0.000
ENSLAFG00000023246 Loxodonta africana ENSLAFG00000023246 I 0.000
ENSLOCG00000011944 Lepisosteus oculatus ENSLOCG00000011944 I 0.000
ENSLOCG00000017552 Lepisosteus oculatus ENSLOCG00000017552 I 0.000
ENSMEUG00000009664 Macropus eugenii ENSMEUG00000009664 I 0.000
ENSMPUG00000019092 Mustela putorius furo ENSMPUG00000019092 I 0.000
ENSNLEG00000018621 Nomascus leucogenys ENSNLEG00000018621 I 0.000
ENSONIG00000015058 Oreochromis niloticus ENSONIG00000015058 I 0.000
ENSONIG00000017784 Oreochromis niloticus ENSONIG00000017784 I 0.000
ENSP00000302216 Macaca fascicularis ENSP00000302216 I 0.000
ENSPANG00000000252 Papio anubis ENSPANG00000000252 I 0.000
ENSPFOG00000019101 Poecilia formosa ENSPFOG00000019101 I 0.000
ENSPFOG00000023785 Poecilia formosa ENSPFOG00000023785 I 0.000
ENSPPYG00000015283 Pongo abelii ENSPPYG00000015283 I 0.000
ENSSHAG00000009094 Sarcophilus harrisii ENSSHAG00000009094 I 0.000
ENSSTOG00000009183 Ictidomys tridecemlineatus ENSSTOG00000009183 I 0.000
ENSXMAG00000009786 Xiphophorus maculatus ENSXMAG00000009786 I 0.000
ENSXMAG00000015349 Xiphophorus maculatus ENSXMAG00000015349 I 0.000
ISCW003667 Ixodes scapularis ISCW003667 I 0.000
Myotis_brandtii_ATOH1_10005345 Myotis brandtii Myotis_brandtii_ATOH1_10005345 I 0.000
Sakowv30002492m.g Saccoglossus kowalevskii Sakowv30002492m.g I 0.000
XP_002937284 Xenopus tropicalis XP_002937284 I 0.000