PGSC0003DMG400005621 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400005621 T004357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400014324 AP2 24 75

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_011632 Theobroma cacao TCM_011632 I 0.683
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.678
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.690
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.705
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.677
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.678
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.678
mgf018851m Mimulus guttatus mgf018851m I 0.705
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.678
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.678
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.681
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.720
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.705
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.680
30174.m008961 Ricinus communis 30174.m008961 I 0.701
30068.m002623 Ricinus communis 30068.m002623 I 0.708
29813.m001543 Ricinus communis 29813.m001543 I 0.680
TCM_015579 Theobroma cacao TCM_015579 I 0.720
TCM_018659 Theobroma cacao TCM_018659 I 0.681
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.681
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.681
Ca_00417 Cicer arietinum Ca_00417 I 0.748
Ca_10494 Cicer arietinum Ca_10494 I 0.681
Ca_16397 Cicer arietinum Ca_16397 I 0.702
Ca_25424 Cicer arietinum Ca_25424 I 0.703
Cla010474 Citrullus lanatus Cla010474 I 0.678
Cla021590 Citrullus lanatus Cla021590 I 0.678
Pm008788 Prunus mume Pm008788 I 0.705
Pm015931 Prunus mume Pm015931 I 0.681
29635.m000461 Ricinus communis 29635.m000461 I 0.681
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.681
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.707
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.716
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.705
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.680
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.681
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.704
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.678
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.678
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.678
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.678
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.678
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.681
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.705
PK13330.1 Cannabis sativa PK13330.1 I 0.681
PK25269.1 Cannabis sativa PK25269.1 I 0.708
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.720
MDP0000551969 Malus domestica MDP0000551969 I 0.681
MDP0000276536 Malus domestica MDP0000276536 I 0.681
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.681
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.705
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.681
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.710
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.705
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.683
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.720
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.734
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.705
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.737
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.704
MDP0000133476 Malus domestica MDP0000133476 I 0.705
MDP0000138669 Malus domestica MDP0000138669 I 0.705
PK28640.1 Cannabis sativa PK28640.1 I 0.721
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.699
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.688
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.722
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.697
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.681
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.681
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.678
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.702
OBART12G17080 Oryza barthii OBART12G17080 I 0.681
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.688
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.681
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.704
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.681
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.702
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.681
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.681
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.706
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.726
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.702
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.702
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.681
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.697
F775_02727 Aegilops tauschii F775_02727 I 0.681
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.702
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.702
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.677
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.681
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.681
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.678
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.698
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.681
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.704
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.681
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.689
Si024417m.g Setaria italica Si024417m.g I 0.678
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.693
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.705
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.693
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.705
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.681
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.681
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.678
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.698
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.678
Si032213m.g Setaria italica Si032213m.g I 0.704
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.681
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.698
TCM_005425 Theobroma cacao TCM_005425 I 0.705
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.681
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.681
OS12G0582900 Oryza sativa OS12G0582900 I 0.681
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.689
Si038848m.g Setaria italica Si038848m.g I 0.681
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.681
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.704
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.764
Cla005054 Citrullus lanatus Cla005054 N 0.689
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.764
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.759
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.791
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.777
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.720
MDP0000316843 Malus domestica MDP0000316843 N 0.760
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.754
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.689
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.776
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.721
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.764
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.758
mgf024137m Mimulus guttatus mgf024137m N 0.754
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.703
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.758
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.721
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.764
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.764
MDP0000127123 Malus domestica MDP0000127123 N 0.764
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N 0.687