PGSC0003DMG400006482 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400006482 T004361_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.867 0.980
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.837 0.909
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.836 0.929
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.821 0.859
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400016583 AP2 25 76
PGSC0003DMT400016584 AP2 25 76
PGSC0003DMT400016585 AP2 135 185
PGSC0003DMT400016585 AP2 227 278

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.869
Bo7g118400 Brassica oleracea Bo7g118400 I 0.867
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.867
Bra011741 Brassica rapa Bra011741 I 0.867
Bra017809 Brassica rapa Bra017809 I 0.867
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.867
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.867
Bo1g004960 Brassica oleracea Bo1g004960 I 0.867
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.867
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.867
Ca_09295 Cicer arietinum Ca_09295 I 0.867
AP2 Arabidopsis thaliana AT4G36920 I 0.867
mgf009315m Mimulus guttatus mgf009315m I 0.867
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.867
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.867
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.866
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.866
Cla000716 Citrullus lanatus Cla000716 I 0.866
PK02403.1 Cannabis sativa PK02403.1 I 0.866
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.866
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.866
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.866
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.866
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.866
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.866
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.866
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.866
LjSGA_043732.1 Lotus japonicus LjSGA_043732.1 N 0.866
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.866
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.866
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.866
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.866
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.865
29805.m001494 Ricinus communis 29805.m001494 I 0.864
TCM_000665 Theobroma cacao TCM_000665 I 0.863
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.863
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.863
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.862
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.860
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.859
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.859
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.859
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.858
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.858
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.858
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.858
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.858
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.858
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.858
Si025305m.g Setaria italica Si025305m.g I 0.858
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.858
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.858
Ca_02499 Cicer arietinum Ca_02499 I 0.858
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.858
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.858
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.858
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.858
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.858
OS05G0121600 Oryza sativa OS05G0121600 I 0.858
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.858
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.858
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.858
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.858
Si012635m.g Setaria italica Si012635m.g I 0.858
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.858
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.858
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.858
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.858
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.858
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.858
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.858
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.858
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.858
28752.m000339 Ricinus communis 28752.m000339 I 0.858
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.858
TCM_042000 Theobroma cacao TCM_042000 I 0.857
TCM_022077 Theobroma cacao TCM_022077 I 0.857
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.857
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.857
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.857
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.857
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.857
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.857
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.857
Pm002492 Prunus mume Pm002492 I 0.857
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.857
F775_32962 Aegilops tauschii F775_32962 I 0.857
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.857
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.857
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.857
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.857
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.857
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.857
MDP0000200319 Malus domestica MDP0000200319 I 0.857
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.856
29169.m000017 Ricinus communis 29169.m000017 I 0.856
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.855
PK07183.1 Cannabis sativa PK07183.1 I 0.855
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.855
mgf021945m Mimulus guttatus mgf021945m I 0.855
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.855
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.855
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.855
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.854
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.854
Pm000974 Prunus mume Pm000974 I 0.854
MDP0000181606 Malus domestica MDP0000181606 I 0.854
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.853
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.853
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.853
MLOC_43830 Hordeum vulgare MLOC_43830 N 0.852
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.852
Traes_2AL_5BA7E2623 Triticum aestivum Traes_2AL_5BA7E2623 N 0.852
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.852
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.851
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.851
Cla018124 Citrullus lanatus Cla018124 I 0.851
MDP0000137561 Malus domestica MDP0000137561 I 0.851
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.850
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.850
Pm030172 Prunus mume Pm030172 I 0.850
OB05G11530 Oryza brachyantha OB05G11530 N 0.850
GRMZM2G076602 Zea mays GRMZM2G076602 N 0.850
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.850
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.850
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.848
MLOC_77763 Hordeum vulgare MLOC_77763 N 0.847
Ca_14618 Cicer arietinum Ca_14618 I 0.846
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.846
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.845
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.845
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.845
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.845
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.845
OB06G29960 Oryza brachyantha OB06G29960 I 0.845
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.845
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.845
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.843
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.842
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.842
PRUPE_ppa021782mg Prunus persica PRUPE_ppa021782mg N 0.841
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.841
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.840
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.840
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.840
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.840
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.840
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.840
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.840
Ca_12010 Cicer arietinum Ca_12010 I 0.839
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.839
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.839
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.838
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.837
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.837
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.836
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.836
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.836
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.836
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.836
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.836
Bra011939 Brassica rapa Bra011939 I 0.835
Bo4g070350 Brassica oleracea Bo4g070350 I 0.835
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.835
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.835
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.834
MDP0000204900 Malus domestica MDP0000204900 N 0.833
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.833
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.833
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.833
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.832
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.832
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.832
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.832
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.832
OBART07G08110 Oryza barthii OBART07G08110 I 0.832
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.832
OB03G45870 Oryza brachyantha OB03G45870 I 0.832
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.832
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.832
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.832
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.832
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.832
OS07G0235800 Oryza sativa OS07G0235800 I 0.832
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.832
mgf005133m Mimulus guttatus mgf005133m I 0.831
mgf010466m Mimulus guttatus mgf010466m I 0.831
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.831
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.830
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.830
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.830
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.830
Si036068m.g Setaria italica Si036068m.g I 0.830
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.830
Si029636m.g Setaria italica Si029636m.g I 0.830
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.830
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.830
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.830
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.830
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.830
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.829
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.828
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.827
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.826
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.826
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.825
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.824
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.822
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.821
P93632_MAIZE Zea mays P93632_MAIZE D 0.821
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.821
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.820
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.819
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.819
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.818
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.818
PGSC0003DMG400006604 Solanum tuberosum PGSC0003DMG400006604 N 0.818
TOE3 Arabidopsis thaliana AT5G67180 I 0.816
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.816
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.816
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.814
MDP0000163645 Malus domestica MDP0000163645 I 0.814
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.814
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.814
Pavir.Gb00344 Panicum virgatum Pavir.Gb00344 N 0.813
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.812
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.812
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.811
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.811
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.811
Bo7g064000 Brassica oleracea Bo7g064000 I 0.810
Bra012139 Brassica rapa Bra012139 I 0.810
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.810
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.809
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.803
Traes_5DL_E88449625 Triticum aestivum Traes_5DL_E88449625 N 0.801
TRIUR3_24919 Triticum urartu TRIUR3_24919 N 0.801
Traes_5BL_5117B3E2A Triticum aestivum Traes_5BL_5117B3E2A N 0.801
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.800
OB07G16010 Oryza brachyantha OB07G16010 N 0.799
OS03G0818800 Oryza sativa OS03G0818800 I 0.797
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.795
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.795
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.795
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.794
Cla020549 Citrullus lanatus Cla020549 I 0.790
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.783
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.779
Cla018549 Citrullus lanatus Cla018549 I 0.775
PDK_20s1709981g002 Phoenix dactylifera PDK_20s1709981g002 N 0.767
Eucgr.A01182 Eucalyptus grandis Eucgr.A01182 N 0.761
PDK_20s1337001g001 Phoenix dactylifera PDK_20s1337001g001 N 0.739
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.723
Si006371m.g Setaria italica Si006371m.g I 0.712
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.708
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.679