PGSC0003DMG400008263 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400008263 T004368_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.745 0.920
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.745 0.920
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.679 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400021311 AP2 100 151

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc10g050970.1 Solanum lycopersicum Solyc10g050970.1 I 0.775
MDP0000175375 Malus domestica MDP0000175375 I 0.760
A4F249_TOBAC Nicotiana tabacum A4F249_TOBAC D 0.745
A4F248_TOBAC Nicotiana tabacum A4F248_TOBAC D 0.745
29801.m003186 Ricinus communis 29801.m003186 I 0.744
PK15705.1 Cannabis sativa PK15705.1 I 0.739
PGSC0003DMG400008264 Solanum tuberosum PGSC0003DMG400008264 I 0.732
GLYMA07G33511 Glycine max GLYMA07G33511 I 0.727
LPERR08G14810 Leersia perrieri LPERR08G14810 I 0.723
PGSC0003DMG400025797 Solanum tuberosum PGSC0003DMG400025797 I 0.717
Solyc01g108240.2 Solanum lycopersicum Solyc01g108240.2 I 0.717
PRUPE_ppa023235mg Prunus persica PRUPE_ppa023235mg I 0.716
Pm021321 Prunus mume Pm021321 I 0.716
chr4.CM0227.40.nd Lotus japonicus chr4.CM0227.40.nd I 0.715
Solyc02g090790.1 Solanum lycopersicum Solyc02g090790.1 I 0.707
Aquca_015_00069 Aquilegia coerulea Aquca_015_00069 I 0.705
PGSC0003DMG400004024 Solanum tuberosum PGSC0003DMG400004024 I 0.704
AMTR_s00016p00092590 Amborella trichopoda AMTR_s00016p00092590 I 0.703
Solyc02g090770.1 Solanum lycopersicum Solyc02g090770.1 I 0.703
POPTR_0004s14840 Populus trichocarpa POPTR_0004s14840 I 0.703
POPTR_0270s00200 Populus trichocarpa POPTR_0270s00200 I 0.703
PGSC0003DMG400004025 Solanum tuberosum PGSC0003DMG400004025 I 0.702
MDP0000317932 Malus domestica MDP0000317932 I 0.701
Gorai.013G043700 Gossypium raimondii Gorai.013G043700 I 0.700
Gorai.005G238000 Gossypium raimondii Gorai.005G238000 I 0.700
Cucsa.219890 Cucumis sativus Cucsa.219890 I 0.699
Cla016262 Citrullus lanatus Cla016262 I 0.699
evm.TU.supercontig_62.11 Carica papaya evm.TU.supercontig_62.11 I 0.698
Eucgr.B03559 Eucalyptus grandis Eucgr.B03559 I 0.698
Bra006195 Brassica rapa Bra006195 I 0.697
TCM_008334 Theobroma cacao TCM_008334 I 0.697
Gorai.005G197100 Gossypium raimondii Gorai.005G197100 I 0.697
Bo3g009120 Brassica oleracea Bo3g009120 I 0.697
Traes_5BL_F5D379AFC Triticum aestivum Traes_5BL_F5D379AFC I 0.696
evm.TU.supercontig_38.79 Carica papaya evm.TU.supercontig_38.79 I 0.696
Ciclev10028930m.g Citrus clementina Ciclev10028930m.g I 0.696
OPUNC08G19980 Oryza punctata OPUNC08G19980 I 0.693
SapurV1A.0643s0230 Salix purpurea SapurV1A.0643s0230 I 0.693
POPTR_0009s10470 Populus trichocarpa POPTR_0009s10470 I 0.693
MTR_4g086160 Medicago truncatula MTR_4g086160 I 0.693
MTR_4g086190 Medicago truncatula MTR_4g086190 I 0.693
SapurV1A.2778s0010 Salix purpurea SapurV1A.2778s0010 I 0.693
cassava38228.valid.m1 Manihot esculenta cassava38228.valid.m1 I 0.692
PGSC0003DMG400023593 Solanum tuberosum PGSC0003DMG400023593 I 0.692
Gorai.008G025100 Gossypium raimondii Gorai.008G025100 I 0.692
Ciclev10005787m.g Citrus clementina Ciclev10005787m.g I 0.692
Solyc04g012050.2 Solanum lycopersicum Solyc04g012050.2 I 0.692
orange1.1g043184m.g Citrus sinensis orange1.1g043184m.g I 0.692
SapurV1A.0340s0060 Salix purpurea SapurV1A.0340s0060 I 0.692
TCM_007061 Theobroma cacao TCM_007061 I 0.692
BGIOSGA029071 Oryza indica BGIOSGA029071 I 0.691
30128.m008556 Ricinus communis 30128.m008556 I 0.691
MTR_4g086165 Medicago truncatula MTR_4g086165 I 0.691
PK12040.1 Cannabis sativa PK12040.1 I 0.691
OMERI08G16840 Oryza meridionalis OMERI08G16840 I 0.691
ORGLA08G0225800 Oryza glaberrima ORGLA08G0225800 I 0.691
Gorai.012G125700 Gossypium raimondii Gorai.012G125700 I 0.691
cassava16956.m1 Manihot esculenta cassava16956.m1 I 0.691
cassava14904.m1 Manihot esculenta cassava14904.m1 I 0.691
cassava16948.m1 Manihot esculenta cassava16948.m1 I 0.691
GLYMA18G51680 Glycine max GLYMA18G51680 I 0.690
GLYMA08G28835 Glycine max GLYMA08G28835 I 0.690
MTR_7g020980 Medicago truncatula MTR_7g020980 I 0.690
SapurV1A.0499s0150 Salix purpurea SapurV1A.0499s0150 I 0.689
POPTR_0001s12990 Populus trichocarpa POPTR_0001s12990 I 0.689
XM_002304604.1 Populus trichocarpa POPTR_0003s16090 I 0.689
PGSC0003DMG400004538 Solanum tuberosum PGSC0003DMG400004538 I 0.689
Sb08g004260 Sorghum bicolor Sb08g004260 I 0.689
GRMZM2G309731 Zea mays GRMZM2G309731 I 0.688
chr1.LjT14I13.10.nd Lotus japonicus chr1.LjT14I13.10.nd I 0.688
mgf022451m Mimulus guttatus mgf022451m I 0.688
BGIOSGA036561 Oryza indica BGIOSGA036561 I 0.686
OBART12G04120 Oryza barthii OBART12G04120 I 0.686
Sb07g025843 Sorghum bicolor Sb07g025843 I 0.686
ONIVA12G03810 Oryza nivara ONIVA12G03810 I 0.686
MLOC_10878 Hordeum vulgare MLOC_10878 I 0.686
ORUFI12G04720 Oryza rufipogon ORUFI12G04720 I 0.686
VIT_01s0150g00120 Vitis vinifera VIT_01s0150g00120 I 0.686
OGLUM12G04880 Oryza glumaepatula OGLUM12G04880 I 0.686
OPUNC12G04190 Oryza punctata OPUNC12G04190 I 0.686
MDP0000316694 Malus domestica MDP0000316694 I 0.685
Pavir.J28880 Panicum virgatum Pavir.J28880 I 0.685
Si013986m.g Setaria italica Si013986m.g I 0.684
MTR_7g021010 Medicago truncatula MTR_7g021010 I 0.683
ORGLA02G0353700 Oryza glaberrima ORGLA02G0353700 I 0.683
ORGLA04G0080400 Oryza glaberrima ORGLA04G0080400 I 0.683
BGIOSGA016313 Oryza indica BGIOSGA016313 I 0.683
OPUNC04G09060 Oryza punctata OPUNC04G09060 I 0.683
OB04G18180 Oryza brachyantha OB04G18180 I 0.683
MDP0000390121 Malus domestica MDP0000390121 I 0.683
Pavir.Gb01735 Panicum virgatum Pavir.Gb01735 I 0.683
Pavir.J34881 Panicum virgatum Pavir.J34881 I 0.683
ONIVA04G08960 Oryza nivara ONIVA04G08960 I 0.683
OGLUM04G10750 Oryza glumaepatula OGLUM04G10750 I 0.683
OS04G0398000 Oryza sativa OS04G0398000 I 0.683
Traes_2BL_E5F50498D Triticum aestivum Traes_2BL_E5F50498D I 0.683
Traes_2DL_2536A1C8C Triticum aestivum Traes_2DL_2536A1C8C I 0.683
Rap2.6L Vitis vinifera VIT_17s0000g00200 I 0.683
ORUFI04G12250 Oryza rufipogon ORUFI04G12250 I 0.683
Traes_2AL_6B6086A7C Triticum aestivum Traes_2AL_6B6086A7C I 0.683
Si010289m.g Setaria italica Si010289m.g I 0.683
GRMZM2G425798 Zea mays GRMZM2G425798 I 0.683
LPERR04G07810 Leersia perrieri LPERR04G07810 I 0.683
GSMUA_Achr10G12150_001 Musa acuminata GSMUA_Achr10G12150_001 I 0.683
GRMZM2G087059 Zea mays GRMZM2G087059 I 0.683
Pm007084 Prunus mume Pm007084 I 0.683
BRADI5G08380 Brachypodium distachyon BRADI5G08380 I 0.683
PRUPE_ppa011097mg Prunus persica PRUPE_ppa011097mg I 0.683
F775_31480 Aegilops tauschii F775_31480 I 0.683
GSMUA_Achr6G08140_001 Musa acuminata GSMUA_Achr6G08140_001 I 0.683
BRADI3G38140 Brachypodium distachyon BRADI3G38140 I 0.682
MTR_4g086220 Medicago truncatula MTR_4g086220 I 0.680
OS08G0474000 Oryza sativa OS08G0474000 I 0.679
OLONG_013554 Oryza longistaminata OLONG_013554 I 0.679
LOC_Os08g36920 Oryza sativa LOC_Os08g36920 D 0.679
OPUNC08G15760 Oryza punctata OPUNC08G15760 I 0.679
OGLUM08G18720 Oryza glumaepatula OGLUM08G18720 I 0.679
GSMUA_Achr3G06960_001 Musa acuminata GSMUA_Achr3G06960_001 I 0.679
ONIVA08G19930 Oryza nivara ONIVA08G19930 I 0.679
Si014237m.g Setaria italica Si014237m.g I 0.678
PGSC0003DMG400025582 Solanum tuberosum PGSC0003DMG400025582 I 0.678
GLYMA02G14940 Glycine max GLYMA02G14940 N 0.678
Solyc06g068830.1 Solanum lycopersicum Solyc06g068830.1 I 0.678