PGSC0003DMG400012526 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400012526 T004395_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1E
M00963_2.00 		Arabidopsis thaliana
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_thaliana 		0.704 0.776
DREB1E
M06589_2.00 		Arabidopsis thaliana
NNNYYGYCGACATVD
HBATGTCGRCRRNNN		 Dap-seq
OMalley et al.(2016)
DDF2_col_a 		0.704 0.776
DREB1E
M09702_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_03 		0.704 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400032623 AP2 49 100

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.816
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.764
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.757
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.750
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.743
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.743
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.743
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.743
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.738
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.736
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.731
MDP0000198054 Malus domestica MDP0000198054 I 0.725
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.724
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.724
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.722
Cla011674 Citrullus lanatus Cla011674 I 0.720
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.719
MDP0000154764 Malus domestica MDP0000154764 I 0.715
Pm023775 Prunus mume Pm023775 I 0.715
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.715
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.714
Pm023772 Prunus mume Pm023772 I 0.714
Pm023777 Prunus mume Pm023777 N 0.714
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.713
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.711
Pm023769 Prunus mume Pm023769 I 0.710
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.710
DREB1E Arabidopsis thaliana AT1G63030 D 0.704
Ca_03665 Cicer arietinum Ca_03665 N 0.703
Ca_04504 Cicer arietinum Ca_04504 I 0.701
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.699
mgf019061m Mimulus guttatus mgf019061m I 0.699
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.699
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.699
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.699
Ca_02407 Cicer arietinum Ca_02407 N 0.699
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.699
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.698
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.698
mgf022408m Mimulus guttatus mgf022408m I 0.697
mgf018934m Mimulus guttatus mgf018934m I 0.697
mgf018631m Mimulus guttatus mgf018631m I 0.697
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.697
mgf016974m Mimulus guttatus mgf016974m I 0.697
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.697
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.695
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.695
mgf017136m Mimulus guttatus mgf017136m I 0.694
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.693
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.693
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.693
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.693
30190.m011120 Ricinus communis 30190.m011120 I 0.692
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.690
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.690
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.690
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.690
mgf026642m Mimulus guttatus mgf026642m I 0.688
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.686
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.686
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.684
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.684
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.683
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.683
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.683
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.683
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.683
PK23332.1 Cannabis sativa PK23332.1 I 0.681
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.681
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.681
60638.m00016 Ricinus communis 60638.m00016 I 0.680
Cla006315 Citrullus lanatus Cla006315 I 0.680
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.679
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.679
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.678
Ca_02408 Cicer arietinum Ca_02408 N 0.677