PGSC0003DMG400012527 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400012527 T004396_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.703 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400032624 AP2 17 67

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g064940 Brassica oleracea Bo8g064940 I 0.790
Bra016761 Brassica rapa Bra016761 I 0.790
PGSC0003DMG400012497 Solanum tuberosum PGSC0003DMG400012497 N 0.746
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.703
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.700
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.700
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.700
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.698
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.698
TCM_016176 Theobroma cacao TCM_016176 I 0.697
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.696
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.696
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.696
Cla011673 Citrullus lanatus Cla011673 I 0.695
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.693
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.692
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.692
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.690
Bo9g036590 Brassica oleracea Bo9g036590 I 0.681
30147.m014311 Ricinus communis 30147.m014311 I 0.681
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.677
Bra027616 Brassica rapa Bra027616 I 0.677
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.677
Bra027615 Brassica rapa Bra027615 I 0.677