PGSC0003DMG400014541 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400014541 T004417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24580.1
M01101_2.00 		Cannabis sativa
VGCCGGCM
KGCCGGCB		 PBM
Lambert et al.(2019)
pTH11280 		0.682 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400037697 AP2 106 157
PGSC0003DMT400037698 AP2 106 157
PGSC0003DMT400037699 AP2 106 157

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc05g009450.1 Solanum lycopersicum Solyc05g009450.1 I 0.795
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.743
GLYMA08G15830 Glycine max GLYMA08G15830 I 0.740
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.715
Cla021763 Citrullus lanatus Cla021763 I 0.713
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.698
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.698
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.698
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.697
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I 0.693
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I 0.693
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.692
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.684
Cla008128 Citrullus lanatus Cla008128 I 0.684
PK24580.1 Cannabis sativa PK24580.1 D 0.682
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.677