PGSC0003DMG400022759 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400022759 T004451_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G63040
M06590_2.00
Arabidopsis thaliana
TTGAAA

TTTCAA
Dap-seq
OMalley et al.(2016)
AT1G63040_col_a
0.751 0.878
ERF027
M06566_2.00
Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN

NTGTCGGYRRNDNNDNNNNNN
Dap-seq
OMalley et al.(2016)
AT1G12630_col_a
0.739 0.918
ERF027
M06567_2.00
Arabidopsis thaliana
NNYYRCCGACANHNNN

NNNDNTGTCGGYRRNN
Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a
0.739 0.918
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400058587 AP2 101 151

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

Invalid Input OrderBy

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action