PGSC0003DMG400023701 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400023701 T004456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.748 0.882
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.748 0.882
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400060936 AP2 32 83

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_05447 Capronia coronata A1O1_05447 I 0.000
A1O3_09301 Capronia epimyces A1O3_09301 N 0.000
A1O5_02721 Cladophialophora psammophila A1O5_02721 N 0.000
A1O9_12160 Exophiala aquamarina A1O9_12160 N 0.000
ARB_03643 Arthroderma benhamiae ARB_03643 I 0.000
BDDG_01351 Blastomyces dermatitidis BDDG_01351 N 0.000
AFUA_2G14680 Aspergillus fumigatus CADAFUAG00004828 N 0.000
CADANGAG00012050 Aspergillus niger CADANGAG00012050 N 0.000
flbB Aspergillus nidulans CADANIAG00000648 N 0.000
NFIA_089910 Neosartorya fischeri CADNFIAG00007772 N 0.000
CIMG_02371 Coccidioides immitis CIMG_02371 N 0.000
CPC735_040120 Coccidioides posadasii CPC735_040120 N 0.000
CPUR_01747 Claviceps purpurea CPUR_01747 I 0.000
CTHT_0003600 Chaetomium thermophilum CTHT_0003600 I 0.000
EPUS_06691 Endocarpon pusillum EPUS_06691 N 0.000
EURHEDRAFT_518989 Aspergillus ruber EURHEDRAFT_518989 I 0.000
fgenesh1_pg.00815_#_163 Aspergillus carbonarius fgenesh1_pg.00815_#_163 N 0.000
G647_03181 Cladophialophora carrionii G647_03181 I 0.000
H101_02270 Trichophyton interdigitale H101_02270 I 0.000
H102_06775 Trichophyton rubrum H102_06775 I 0.000
H105_06815 Trichophyton soudanense H105_06815 I 0.000
HCBG_09056 Histoplasma capsulatum HCBG_09056 N 0.000
HMPREF1120_07543 Exophiala dermatitidis HMPREF1120_07543 N 0.000
HMPREF1541_10536 Cyphellophora europaea HMPREF1541_10536 N 0.000
MGYG_05249 Microsporum gypseum MGYG_05249 N 0.000
PAAG_01697 Paracoccidioides sp lutzii PAAG_01697 N 0.000
PABG_03746 Paracoccidioides brasiliensis PABG_03746 N 0.000
PV04_07337 Capronia semiimmersa PV04_07337 N 0.000
PV05_10158 Exophiala xenobiotica PV05_10158 N 0.000
PV07_11049 Cladophialophora immunda PV07_11049 N 0.000
PV08_00976 Exophiala spinifera PV08_00976 N 0.000
PV10_03189 Exophiala mesophila PV10_03189 I 0.000
PV11_09613 Exophiala sideris PV11_09613 N 0.000
PVAR5_8450 Byssochlamys spectabilis PVAR5_8450 N 0.000
TEQG_00005 Trichophyton equinum TEQG_00005 I 0.000
TESG_03658 Trichophyton tonsurans TESG_03658 I 0.000
TRV_01964 Trichophyton verrucosum TRV_01964 I 0.000
Z517_02456 Fonsecaea pedrosoi Z517_02456 I 0.000
Z518_09586 Rhinocladiella mackenziei Z518_09586 N 0.000
Z519_07258 Cladophialophora bantiana Z519_07258 N 0.000