PGSC0003DMG400027502 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400027502 T004480_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400070735 AP2 65 122
PGSC0003DMT400070735 AP2 164 216

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

287 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29822.m003477 Ricinus communis 29822.m003477 N 0.798
30069.m000440 Ricinus communis 30069.m000440 N 0.863
30114.m000507 Ricinus communis 30114.m000507 N 0.777
ADAP Arabidopsis thaliana AT1G16060 I 0.778
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.786
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.804
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.817
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.777
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.722
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.793
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.803
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.758
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.776
BGIOSGA004677 Oryza indica BGIOSGA004677 N 0.711
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.730
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.766
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.778
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.811
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.837
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.837
Bo5g021520 Brassica oleracea Bo5g021520 N 0.783
Bo6g067950 Brassica oleracea Bo6g067950 I 0.816
Bo6g124080 Brassica oleracea Bo6g124080 N 0.789
Bo8g083590 Brassica oleracea Bo8g083590 I 0.820
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.819
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.784
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.786
Bra003178 Brassica rapa Bra003178 N 0.865
Bra007066 Brassica rapa Bra007066 N 0.868
Bra026082 Brassica rapa Bra026082 I 0.775
Bra035137 Brassica rapa Bra035137 I 0.784
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.738
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.771
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.837
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.812
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.811
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.819
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.767
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.748
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.777
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.819
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.783
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.798
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.862
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.757
Ca_03306 Cicer arietinum Ca_03306 N 0.788
Ca_10533 Cicer arietinum Ca_10533 N 0.796
Ca_17532 Cicer arietinum Ca_17532 N 0.840
Ca_20689 Cicer arietinum Ca_20689 N 0.812
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.776
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.773
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.812
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.860
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.812
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.771
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.800
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.747
Cla015555 Citrullus lanatus Cla015555 N 0.803
Cla017294 Citrullus lanatus Cla017294 N 0.810
Cla019044 Citrullus lanatus Cla019044 N 0.804
Cla020765 Citrullus lanatus Cla020765 N 0.866
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.797
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.799
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.814
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.771
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.785
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.807
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.752
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.816
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.771
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.752
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.811
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.803
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.866
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.737
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.840
F775_02064 Aegilops tauschii F775_02064 N 0.722
F775_02400 Aegilops tauschii F775_02400 I 0.738
F775_06373 Aegilops tauschii F775_06373 N 0.814
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.782
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.826
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.754
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.810
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.808
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.802
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.810
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.808
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.801
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.843
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.812
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.764
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.751
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.809
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.802
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.765
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.751
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.815
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.799
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.759
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.786
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.791
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.812
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.788
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.803
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.783
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.766
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.748
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.829
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.803
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.806
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.834
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.728
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.795
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.795
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.818
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.739
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.745
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.748
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.819
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.812
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.821
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.812
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.764
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.850
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.750
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.797
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.851
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.764
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.750
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.757
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.757
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.800
MDP0000133423 Malus domestica MDP0000133423 N 0.808
MDP0000166059 Malus domestica MDP0000166059 N 0.826
MDP0000186581 Malus domestica MDP0000186581 N 0.750
MDP0000206674 Malus domestica MDP0000206674 N 0.742
MDP0000231748 Malus domestica MDP0000231748 N 0.810
MDP0000281784 Malus domestica MDP0000281784 I 0.750
MDP0000297698 Malus domestica MDP0000297698 N 0.750
MDP0000318457 Malus domestica MDP0000318457 N 0.808
mg013664m Mimulus guttatus mg013664m N 0.804
mgf008907m Mimulus guttatus mgf008907m I 0.779
mgf017413m Mimulus guttatus mgf017413m N 0.759
mgf019116m Mimulus guttatus mgf019116m N 0.818
mgf019814m Mimulus guttatus mgf019814m N 0.804
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.812
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.839
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.783
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.799
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.770
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.809
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.843
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.772
OB01G43640 Oryza brachyantha OB01G43640 N 0.752
OB05G31600 Oryza brachyantha OB05G31600 I 0.729
OB08G23780 Oryza brachyantha OB08G23780 N 0.702
OB09G17420 Oryza brachyantha OB09G17420 I 0.811
OB11G11380 Oryza brachyantha OB11G11380 I 0.818
OB12G11690 Oryza brachyantha OB12G11690 I 0.818
OBART01G34800 Oryza barthii OBART01G34800 N 0.711
OBART06G03040 Oryza barthii OBART06G03040 N 0.766
OBART09G10730 Oryza barthii OBART09G10730 N 0.812
OBART12G01740 Oryza barthii OBART12G01740 N 0.808
OGLUM01G38820 Oryza glumaepatula OGLUM01G38820 N 0.711
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.819
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.812
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.742
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.777
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.730
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.748
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.734
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.819
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.812
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.837
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.837
ONIVA01G39780 Oryza nivara ONIVA01G39780 N 0.711
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.837
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.766
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.819
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.811
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.837
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.730
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.821
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.780
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.837
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.837
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.800
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.860
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.771
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.719
ORGLA01G0286200 Oryza glaberrima ORGLA01G0286200 N 0.711
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.766
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.778
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.811
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.818
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.837
ORUFI01G38130 Oryza rufipogon ORUFI01G38130 N 0.711
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.766
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.819
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.812
OS05G0536250 Oryza sativa OS05G0536250 I 0.730
OS06G0145700 Oryza sativa OS06G0145700 N 0.753
OS08G0442400 Oryza sativa OS08G0442400 I 0.778
OS09G0423800 Oryza sativa OS09G0423800 I 0.811
OS12G0126300 Oryza sativa OS12G0126300 I 0.818
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.805
Pavir.Ea03213 Panicum virgatum Pavir.Ea03213 N 0.681
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.748
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.708
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.766
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.748
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.708
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.743
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.741
PK04008.1 Cannabis sativa PK04008.1 I 0.814
PK24809.1 Cannabis sativa PK24809.1 I 0.754
PK26651.1 Cannabis sativa PK26651.1 I 0.797
Pm006561 Prunus mume Pm006561 N 0.761
Pm008629 Prunus mume Pm008629 I 0.803
Pm013856 Prunus mume Pm013856 N 0.811
Pm015843 Prunus mume Pm015843 N 0.761
Pm015847 Prunus mume Pm015847 N 0.768
Pm017032 Prunus mume Pm017032 N 0.868
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.803
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.752
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.751
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.706
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.767
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.903
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.798
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.812
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.811
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.761
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.768
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.803
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.798
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.861
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.874
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.803
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.803
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.803
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.811
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.732
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.829
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.782
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.748
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.766
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.750
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.786
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.748
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.866
Si004222m.g Setaria italica Si004222m.g N 0.704
Si007857m.g Setaria italica Si007857m.g N 0.769
Si012026m.g Setaria italica Si012026m.g N 0.821
Si013842m.g Setaria italica Si013842m.g N 0.777
Si022186m.g Setaria italica Si022186m.g I 0.748
Si026433m.g Setaria italica Si026433m.g N 0.821
Si030129m.g Setaria italica Si030129m.g I 0.812
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.870
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.796
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.751
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.776
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.779
TCM_011797 Theobroma cacao TCM_011797 N 0.753
TCM_018386 Theobroma cacao TCM_018386 N 0.771
TCM_027569 Theobroma cacao TCM_027569 I 0.802
TCM_038442 Theobroma cacao TCM_038442 N 0.808
TCM_044588 Theobroma cacao TCM_044588 I 0.816
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.778
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.868
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.742
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.703
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.761
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.814
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.811
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.814
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.769
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.738
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.681
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.844
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.802
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.803
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.793
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.798
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.868
WRI1 Arabidopsis thaliana AT3G54320 I 0.819
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.764