CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400027904
(
Solanum tuberosum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PGSC0003DMG400027904
T004481_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.858
0.949
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.848
0.970
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.843
0.960
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.814
0.848
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400071726
AP2
129
161
SQYRGVTFYRRTGRWESHIWSVYFLQKKFPITV
PGSC0003DMT400071727
AP2
129
161
SQYRGVTFYRRTGRWESHIWSVYFLQKKFPITV
PGSC0003DMT400071728
AP2
129
161
SQYRGVTFYRRTGRWESHIWSVYFLQKKFPITV
PGSC0003DMT400071729
AP2
129
161
SQYRGVTFYRRTGRWESHIWSVYFLQKKFPITV
PGSC0003DMT400071730
AP2
129
161
SQYRGVTFYRRTGRWESHIWSVYFLQKKFPITV
PGSC0003DMT400071731
AP2
129
179
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
PGSC0003DMT400071731
AP2
221
273
SKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFELSTYEGELS
PGSC0003DMT400071732
AP2
129
179
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
PGSC0003DMT400071732
AP2
221
272
SKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGR
PGSC0003DMT400071733
AP2
129
161
SQYRGVTFYRRTGRWESHIWSVYFLQKKFPITV
Links
Other
AP2
family TFs
Other
Solanum tuberosum
TFs
253 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy