PGSC0003DMG400038366 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400038366 T004502_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.719 0.860
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.719 0.860
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.719 0.860
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.719 0.860
DREB1F
M00962_2.00
Arabidopsis thaliana
NRCCGACNN

NNGTCGGYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana
0.693 0.720
DREB1F
M00840_2.00
Arabidopsis thaliana
NRYCGACNN

NNGTCGRYN
PBM
Franco-Zorrilla et al.(2014)
DDF1
0.693 0.720
DDF1
M00964_2.00
Arabidopsis lyrata
NRYCGACDY

RHGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata
0.693 0.720
DREB1F
M06564_2.00
Arabidopsis thaliana
NHNHYGYCGACATNN

NNATGTCGRCRDNDN
Dap-seq
OMalley et al.(2016)
DDF1_col_a
0.693 0.720
DREB1F
M06565_2.00
Arabidopsis thaliana
HNDNNRYCGACAH

DTGTCGRYNNHND
Dap-seq
OMalley et al.(2016)
DDF1_colamp_a
0.693 0.720
DREB1F
M09701_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1F_03
0.693 0.720
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.683 0.820
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.683 0.820
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.683 0.820
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.678 0.820
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.678 0.820
Q8S2T3_BRANA
M09745_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF16_01
0.678 0.820
Q6T3U0_BRANA
M09743_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBII1_01
0.678 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400088795 AP2 53 104

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000009099 Ailuropoda melanoleuca ENSAMEG00000009099 N 0.000
ENSAMEG00000005350 Ailuropoda melanoleuca ENSAMEG00000005350 I 0.000
ENSAPLG00000009362 Anas platyrhynchos ENSAPLG00000009362 I 0.000
ENSAPLG00000008131 Anas platyrhynchos ENSAPLG00000008131 I 0.000
SATB2 Anolis carolinensis ENSACAG00000009821 I 0.000
SATB1 Anolis carolinensis ENSACAG00000007941 I 0.000
Afo_R004114 Aptenodytes forsteri Afo_R004114 I 0.000
Afo_R015456 Aptenodytes forsteri Afo_R015456 I 0.000
ENSAMXG00000002186 Astyanax mexicanus ENSAMXG00000002186 I 0.000
ENSAMXG00000015155 Astyanax mexicanus ENSAMXG00000015155 I 0.000
ENSP00000333367-D2 Bos grunniens ENSP00000333367-D2 N 0.000
ENSP00000401112-D1 Bos grunniens ENSP00000401112-D1 I 0.000
SATB1 Bos taurus ENSBTAG00000021158 I 0.000
SATB2 Bos taurus ENSBTAG00000016334 I 0.000
Brh_R001953 Buceros rhinoceros Brh_R001953 I 0.000
Brh_R012783 Buceros rhinoceros Brh_R012783 N 0.000
SATB2 Callithrix jacchus ENSCJAG00000004111 I 0.000
SATB1 Callithrix jacchus ENSCJAG00000003645 I 0.000
Aan_R010578 Calypte anna Aan_R010578 I 0.000
Aan_R006754 Calypte anna Aan_R006754 I 0.000
SATB1 Canis familiaris ENSCAFG00000005839 N 0.000
SATB2 Canis familiaris ENSCAFG00000010971 I 0.000
SATB1 Cavia porcellus ENSCPOG00000007101 I 0.000
SATB2 Cavia porcellus ENSCPOG00000015198 I 0.000
ENSCSAG00000009921 Chlorocebus sabaeus ENSCSAG00000009921 N 0.000
ENSCSAG00000011380 Chlorocebus sabaeus ENSCSAG00000011380 I 0.000
SATB2 Choloepus hoffmanni ENSCHOG00000012005 I 0.000
SATB1 Choloepus hoffmanni ENSCHOG00000002142 I 0.000
satb2 Danio rerio ENSDARG00000061885 I 0.000
satb1b Danio rerio ENSDARG00000062621 I 0.000
satb1a Danio rerio ENSDARG00000057649 N 0.000
SATB2 Dasypus novemcinctus ENSDNOG00000001292 I 0.000
SATB1 Dasypus novemcinctus ENSDNOG00000025323 I 0.000
Satb1 Dipodomys ordii ENSDORG00000005578 I 0.000
SATB1 Equus caballus ENSECAG00000023585 I 0.000
SATB2 Equus caballus ENSECAG00000010043 I 0.000
SATB1 Erinaceus europaeus ENSEEUG00000010435 I 0.000
SATB2 Felis catus ENSFCAG00000015781 I 0.000
SATB1 Felis catus ENSFCAG00000004295 I 0.000
ENSFALG00000009258 Ficedula albicollis ENSFALG00000009258 I 0.000
ENSFALG00000004242 Ficedula albicollis ENSFALG00000004242 I 0.000
ENSGMOG00000006865 Gadus morhua ENSGMOG00000006865 I 0.000
ENSGMOG00000011439 Gadus morhua ENSGMOG00000011439 N 0.000
ENSGMOG00000013657 Gadus morhua ENSGMOG00000013657 I 0.000
ENSGMOG00000007176 Gadus morhua ENSGMOG00000007176 N 0.000
SATB1 Gallus gallus ENSGALG00000011254 I 0.000
SATB2 Gallus gallus ENSGALG00000008135 I 0.000
satb1a Gasterosteus aculeatus ENSGACG00000006960 N 0.000
SATB2 Gasterosteus aculeatus ENSGACG00000009037 I 0.000
satb1b Gasterosteus aculeatus ENSGACG00000013013 I 0.000
satb2 Gasterosteus aculeatus ENSGACG00000014437 I 0.000
Gfo_R015811 Geospiza fortis Gfo_R015811 I 0.000
Gfo_R001489 Geospiza fortis Gfo_R001489 I 0.000
SATB2 Gorilla gorilla ENSGGOG00000014123 I 0.000
SATB1 Gorilla gorilla ENSGGOG00000001779 I 0.000
SATB1 Homo sapiens ENSG00000182568 D 0.000
SATB2 Homo sapiens ENSG00000119042 I 0.000
ENSSTOG00000024964 Ictidomys tridecemlineatus ENSSTOG00000024964 N 0.000
ENSLACG00000005399 Latimeria chalumnae ENSLACG00000005399 I 0.000
ENSLACG00000017798 Latimeria chalumnae ENSLACG00000017798 I 0.000
ENSLOCG00000004032 Lepisosteus oculatus ENSLOCG00000004032 I 0.000
ENSLOCG00000006524 Lepisosteus oculatus ENSLOCG00000006524 I 0.000
SATB2 Loxodonta africana ENSLAFG00000002924 I 0.000
SATB1 Loxodonta africana ENSLAFG00000009015 I 0.000
ENSP00000333367 Macaca fascicularis ENSP00000333367 I 0.000
ENSP00000405420 Macaca fascicularis ENSP00000405420 I 0.000
ENSMMUG00000019009 Macaca mulatta ENSMMUG00000019009 I 0.000
SATB1 Meleagris gallopavo ENSMGAG00000010929 I 0.000
SATB2 Meleagris gallopavo ENSMGAG00000007173 I 0.000
SATB2 Microcebus murinus ENSMICG00000009378 I 0.000
SATB1 Microcebus murinus ENSMICG00000017153 I 0.000
SATB1 Monodelphis domestica ENSMODG00000014765 I 0.000
SATB2 Monodelphis domestica ENSMODG00000012352 I 0.000
ENSMPUG00000001406 Mustela putorius furo ENSMPUG00000001406 I 0.000
ENSMPUG00000007972 Mustela putorius furo ENSMPUG00000007972 I 0.000
Satb1 Mus musculus ENSMUSG00000023927 I 0.000
Satb2 Mus musculus ENSMUSG00000038331 I 0.000
Myotis_brandtii_Satb1_10034564 Myotis brandtii Myotis_brandtii_Satb1_10034564 I 0.000
Myotis_brandtii_Satb2_10019975 Myotis brandtii Myotis_brandtii_Satb2_10019975 I 0.000
SATB1 Myotis lucifugus ENSMLUG00000001860 I 0.000
SATB2 Myotis lucifugus ENSMLUG00000001554 I 0.000
ENSNLEG00000000912 Nomascus leucogenys ENSNLEG00000000912 I 0.000
ENSNLEG00000006893 Nomascus leucogenys ENSNLEG00000006893 I 0.000
SATB2 Ochotona princeps ENSOPRG00000003979 I 0.000
Ogr08410 Ophisaurus gracilis Ogr08410 I 0.000
Ogr08679 Ophisaurus gracilis Ogr08679 I 0.000
ENSONIG00000013780 Oreochromis niloticus ENSONIG00000013780 I 0.000
ENSONIG00000004539 Oreochromis niloticus ENSONIG00000004539 N 0.000
ENSONIG00000008688 Oreochromis niloticus ENSONIG00000008688 I 0.000
ENSONIG00000015271 Oreochromis niloticus ENSONIG00000015271 I 0.000
ENSOANG00000004992 Ornithorhynchus anatinus ENSOANG00000004992 I 0.000
SATB1 Oryctolagus cuniculus ENSOCUG00000007174 I 0.000
SATB2 Oryctolagus cuniculus ENSOCUG00000009700 I 0.000
satb1a Oryzias latipes ENSORLG00000004761 N 0.000
SATB1 Otolemur garnettii ENSOGAG00000015441 I 0.000
SATB2 Otolemur garnettii ENSOGAG00000006949 I 0.000
ENSOARG00000015783 Ovis aries ENSOARG00000015783 I 0.000
ENSOARG00000015604 Ovis aries ENSOARG00000015604 I 0.000
SATB1 Pan troglodytes ENSPTRG00000014677 I 0.000
SATB2 Pan troglodytes ENSPTRG00000012779 I 0.000
ENSPANG00000004656 Papio anubis ENSPANG00000004656 N 0.000
ENSPANG00000011212 Papio anubis ENSPANG00000011212 I 0.000
ENSPSIG00000018044 Pelodiscus sinensis ENSPSIG00000018044 I 0.000
ENSPMAG00000005314 Petromyzon marinus ENSPMAG00000005314 I 0.000
ENSPFOG00000003900 Poecilia formosa ENSPFOG00000003900 I 0.000
ENSPFOG00000005488 Poecilia formosa ENSPFOG00000005488 I 0.000
ENSPFOG00000000642 Poecilia formosa ENSPFOG00000000642 I 0.000
ENSPFOG00000004509 Poecilia formosa ENSPFOG00000004509 I 0.000
Pvit_10645 Pogona vitticeps Pvit_10645 I 0.000
Pvit_16605 Pogona vitticeps Pvit_16605 I 0.000
ENSPPYG00000014077 Pongo abelii ENSPPYG00000014077 I 0.000
ENSPPYG00000013052 Pongo abelii ENSPPYG00000013052 I 0.000
SATB2 Procavia capensis ENSPCAG00000012822 I 0.000
SATB1 Procavia capensis ENSPCAG00000008567 I 0.000
SATB2 Pteropus vampyrus ENSPVAG00000012029 I 0.000
Satb2 Rattus norvegicus ENSRNOG00000010188 I 0.000
ENSSHAG00000015368 Sarcophilus harrisii ENSSHAG00000015368 I 0.000
ENSSHAG00000011077 Sarcophilus harrisii ENSSHAG00000011077 I 0.000
SATB2 Sorex araneus ENSSARG00000014343 I 0.000
SATB1 Sorex araneus ENSSARG00000006820 N 0.000
ENSSSCG00000030990 Sus scrofa ENSSSCG00000030990 N 0.000
SATB1 Sus scrofa ENSSSCG00000011201 I 0.000
SATB1 Taeniopygia guttata ENSTGUG00000003198 I 0.000
SATB2 Taeniopygia guttata ENSTGUG00000010480 I 0.000
SATB2 Takifugu rubripes ENSTRUG00000015384 I 0.000
satb2 Takifugu rubripes ENSTRUG00000005073 I 0.000
ENSTRUG00000009881 Takifugu rubripes ENSTRUG00000009881 N 0.000
satb1a Takifugu rubripes ENSTRUG00000005121 N 0.000
ENSTSYG00000005284 Tarsius syrichta ENSTSYG00000005284 I 0.000
satb1b Tetraodon nigroviridis ENSTNIG00000011663 I 0.000
satb2 Tetraodon nigroviridis ENSTNIG00000014467 I 0.000
satb1a Tetraodon nigroviridis ENSTNIG00000017750 N 0.000
SATB2 Tetraodon nigroviridis ENSTNIG00000005271 I 0.000
SATB1 Tursiops truncatus ENSTTRG00000006209 I 0.000
Tal_R004830 Tyto alba Tal_R004830 N 0.000
Tal_R006309 Tyto alba Tal_R006309 I 0.000
SATB1 Vicugna pacos ENSVPAG00000011890 N 0.000
satb2 Xenopus tropicalis XB-GENE-5822252 I 0.000
satb1 Xenopus tropicalis XB-GENE-854103 I 0.000
ENSXMAG00000000865 Xiphophorus maculatus ENSXMAG00000000865 I 0.000
ENSXMAG00000004215 Xiphophorus maculatus ENSXMAG00000004215 I 0.000
ENSXMAG00000018662 Xiphophorus maculatus ENSXMAG00000018662 I 0.000
ENSXMAG00000007412 Xiphophorus maculatus ENSXMAG00000007412 I 0.000