POPTR_0003s17830 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0003s17830 T004625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.857 0.980
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.857 0.980
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.727 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s17830.1 AP2 6 57

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_04327 Ancylostoma caninum ANCCAN_04327 N 0.000
ANCCEY_00583 Ancylostoma ceylanicum ANCCEY_00583 N 0.000
DICVIV_10715 Dictyocaulus viviparus DICVIV_10715 N 0.000
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N 0.000
ENSOANG00000029773 Ornithorhynchus anatinus ENSOANG00000029773 I 0.000
NBR_0000542501 Nippostrongylus brasiliensis NBR_0000542501 N 0.000
NBR_0002182001 Nippostrongylus brasiliensis NBR_0002182001 N 0.000
SMUV_0000075501 Syphacia muris SMUV_0000075501 N 0.000