POPTR_0005s15830 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0005s15830 T004637_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.782 0.960
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.768 0.920
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN

NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.749 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s15830.1 AP2 30 81

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pg.C_chr_1.1000125 Pichia stipitis fgenesh1_pg.C_chr_1.1000125 N 0.000
GNLVRS01_PISO0A01232g Millerozyma farinosa GNLVRS01_PISO0A01232g N 0.000
GNLVRS01_PISO0B01387g Millerozyma farinosa GNLVRS01_PISO0B01387g N 0.000
PICST_28111 Scheffersomyces stipitis PICST_28111 N 0.000