POPTR_0005s24470 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0005s24470 T004646_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.712 0.816
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.701 0.857
ERF15
M00718_2.00
Arabidopsis thaliana
NGSCGSCB

VGSCGSCN
PBM
Chang et al.(2013)
pTH7336
0.682 0.796
ERF15
M06604_2.00
Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY

RHGGCGGCKVHDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF15_colamp_a
0.682 0.796
ERF15
M06605_2.00
Arabidopsis thaliana
NNYHDYMGCCGCCRY

RYGGCGGCKRHDRNN
Dap-seq
OMalley et al.(2016)
ERF15_col
0.682 0.796
P93392_TOBAC
M09731_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.681 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s24470.1 AP2 105 157

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.768
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.768
Traes_4AL_F18648C49 Triticum aestivum Traes_4AL_F18648C49 I 0.761
Gorai.007G280900 Gossypium raimondii Gorai.007G280900 I 0.746
Gorai.007G280800 Gossypium raimondii Gorai.007G280800 I 0.746
TCM_026234 Theobroma cacao TCM_026234 I 0.735
TCM_004056 Theobroma cacao TCM_004056 I 0.734
Lus10006579.g Linum usitatissimum Lus10006579.g I 0.734
SapurV1A.3984s0010 Salix purpurea SapurV1A.3984s0010 I 0.732
SapurV1A.0006s0840 Salix purpurea SapurV1A.0006s0840 I 0.732
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.730
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.730
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.727
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.726
29680.m001678 Ricinus communis 29680.m001678 I 0.724
MDP0000322279 Malus domestica MDP0000322279 I 0.721
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.719
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.719
POPTR_0002s04010 Populus trichocarpa POPTR_0002s04010 I 0.719
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.719
29584.m000234 Ricinus communis 29584.m000234 I 0.719
TCM_026233 Theobroma cacao TCM_026233 I 0.718
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.718
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.718
Lus10014655.g Linum usitatissimum Lus10014655.g I 0.718
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.717
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.715
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.713
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.713
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.712
ERF094 Arabidopsis thaliana AT1G06160 D 0.712
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.711
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.710
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.710
LPERR03G35710 Leersia perrieri LPERR03G35710 I 0.710
Gorai.013G186800 Gossypium raimondii Gorai.013G186800 I 0.710
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.710
Ca_07754 Cicer arietinum Ca_07754 I 0.710
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.709
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.709
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.709
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.709
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.708
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.707
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.706
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.705
Si038911m.g Setaria italica Si038911m.g I 0.705
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.705
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.705
F775_25471 Aegilops tauschii F775_25471 I 0.705
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.705
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.704
PGSC0003DMG400013255 Solanum tuberosum PGSC0003DMG400013255 I 0.704
Solyc11g011740.1 Solanum lycopersicum Solyc11g011740.1 I 0.704
Thhalv10008518m.g Eutrema salsugineum Thhalv10008518m.g I 0.703
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.703
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.703
Cagra.1671s0247 Capsella grandiflora Cagra.1671s0247 I 0.702
Bostr.25219s0341 Boechera stricta Bostr.25219s0341 I 0.702
Carubv10010105m.g Capsella rubella Carubv10010105m.g I 0.702
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.702
mgf018693m Mimulus guttatus mgf018693m I 0.702
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.701
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.701
Q5Y836_TOBAC Nicotiana tabacum Q5Y836_TOBAC D 0.701
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.701
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.701
Bra015478 Brassica rapa Bra015478 I 0.701
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.700
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.700
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.700
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.699
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.699
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.699
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.699
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.699
TCM_004052 Theobroma cacao TCM_004052 I 0.698
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.698
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.698
BGIOSGA009392 Oryza indica BGIOSGA009392 I 0.697
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.697
Bo8g114710 Brassica oleracea Bo8g114710 I 0.697
OMERI03G15490 Oryza meridionalis OMERI03G15490 I 0.697
ONIVA01G48030 Oryza nivara ONIVA01G48030 I 0.697
OLONG_002067 Oryza longistaminata OLONG_002067 I 0.697
OGLUM03G41640 Oryza glumaepatula OGLUM03G41640 I 0.697
OBART03G41810 Oryza barthii OBART03G41810 I 0.697
OS03G0860100 Oryza sativa OS03G0860100 I 0.697
Bo5g007280 Brassica oleracea Bo5g007280 I 0.697
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.697
ORUFI03G43580 Oryza rufipogon ORUFI03G43580 I 0.697
ORGLA03G0387300 Oryza glaberrima ORGLA03G0387300 I 0.697
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.696
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.696
Solyc09g066360.1 Solanum lycopersicum Solyc09g066360.1 I 0.696
Gorai.004G220800 Gossypium raimondii Gorai.004G220800 I 0.695
Eucgr.H04254 Eucalyptus grandis Eucgr.H04254 I 0.695
PGSC0003DMG400010285 Solanum tuberosum PGSC0003DMG400010285 I 0.695
MDP0000447570 Malus domestica MDP0000447570 I 0.694
MDP0000246808 Malus domestica MDP0000246808 I 0.694
Traes_2AL_0B28B6DBE Triticum aestivum Traes_2AL_0B28B6DBE I 0.694
Traes_5BL_FBC7AF288 Triticum aestivum Traes_5BL_FBC7AF288 I 0.694
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.693
Pm003579 Prunus mume Pm003579 I 0.693
Ca_12081 Cicer arietinum Ca_12081 I 0.693
PRUPE_ppa016384mg Prunus persica PRUPE_ppa016384mg I 0.693
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.692
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.691
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.690
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.690
F775_22331 Aegilops tauschii F775_22331 I 0.690
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.690
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.689
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.689
Si033089m.g Setaria italica Si033089m.g I 0.689
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.689
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.689
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.688
ONIVA01G50300 Oryza nivara ONIVA01G50300 I 0.687
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.687
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.687
gene16619-v1.0-hybrid Fragaria vesca gene16619-v1.0-hybrid I 0.687
BGIOSGA024429 Oryza indica BGIOSGA024429 I 0.687
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.687
OBART07G11330 Oryza barthii OBART07G11330 I 0.687
OBART03G03890 Oryza barthii OBART03G03890 I 0.687
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.687
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.687
ORGLA07G0097000 Oryza glaberrima ORGLA07G0097000 I 0.687
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.687
OS03G0150200 Oryza sativa OS03G0150200 I 0.687
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.687
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.687
ORUFI07G11580 Oryza rufipogon ORUFI07G11580 I 0.687
AMTR_s00021p00184450 Amborella trichopoda AMTR_s00021p00184450 I 0.686
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.686
ORA59 Arabidopsis lyrata fgenesh2_kg.1__587__AT1G06160.1 I 0.686
PGSC0003DMG400017231 Solanum tuberosum PGSC0003DMG400017231 I 0.685
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.685
Solyc09g089930.1 Solanum lycopersicum Solyc09g089930.1 I 0.685
F775_22020 Aegilops tauschii F775_22020 I 0.685
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.685
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.685
Si032815m.g Setaria italica Si032815m.g I 0.685
Bo4g176080 Brassica oleracea Bo4g176080 I 0.683
Bra021712 Brassica rapa Bra021712 I 0.683
Cagra.6952s0002 Capsella grandiflora Cagra.6952s0002 I 0.682
Bostr.24513s0101 Boechera stricta Bostr.24513s0101 I 0.682
Carubv10025229m.g Capsella rubella Carubv10025229m.g I 0.682
ERF15 Arabidopsis thaliana AT2G31230 D 0.682
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.682
Bo4g052480 Brassica oleracea Bo4g052480 I 0.682
PK23186.1 Cannabis sativa PK23186.1 I 0.682
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.682
Bra018271 Brassica rapa Bra018271 I 0.682
ATERF15 Arabidopsis lyrata fgenesh2_kg.4__1110__AT2G31230.1 I 0.682
Cucsa.201950 Cucumis sativus Cucsa.201950 I 0.681
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.681
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.681
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.681
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.681
F775_52314 Aegilops tauschii F775_52314 I 0.681
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.681
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.681
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.680
Thhalv10017149m.g Eutrema salsugineum Thhalv10017149m.g I 0.680
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.680
Solyc03g005520.1 Solanum lycopersicum Solyc03g005520.1 I 0.680
ONIVA10G08250 Oryza nivara ONIVA10G08250 I 0.680
ORGLA10G0072500 Oryza glaberrima ORGLA10G0072500 I 0.680
ORUFI10G09060 Oryza rufipogon ORUFI10G09060 I 0.680
OS10G0390800 Oryza sativa OS10G0390800 I 0.680
OMERI10G05820 Oryza meridionalis OMERI10G05820 I 0.680
OGLUM10G08400 Oryza glumaepatula OGLUM10G08400 I 0.680
BGIOSGA032849 Oryza indica BGIOSGA032849 I 0.680
Bo3g025110 Brassica oleracea Bo3g025110 I 0.680
Bra022832 Brassica rapa Bra022832 I 0.680
PGSC0003DMG400014204 Solanum tuberosum PGSC0003DMG400014204 I 0.680
PGSC0003DMG400013402 Solanum tuberosum PGSC0003DMG400013402 I 0.680
mgf023600m Mimulus guttatus mgf023600m I 0.680
Ca_12221 Cicer arietinum Ca_12221 I 0.680
OMERI05G16180 Oryza meridionalis OMERI05G16180 I 0.679
ONIVA05G19500 Oryza nivara ONIVA05G19500 I 0.679
OPUNC05G16280 Oryza punctata OPUNC05G16280 I 0.679
OGLUM05G19620 Oryza glumaepatula OGLUM05G19620 I 0.679
ORGLA05G0161000 Oryza glaberrima ORGLA05G0161000 I 0.679
OBART05G18540 Oryza barthii OBART05G18540 I 0.679
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.679
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.679
PGSC0003DMG400045092 Solanum tuberosum PGSC0003DMG400045092 I 0.679
ORUFI05G19730 Oryza rufipogon ORUFI05G19730 I 0.679
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.679
SapurV1A.0816s0060 Salix purpurea SapurV1A.0816s0060 I 0.678
mgf022372m Mimulus guttatus mgf022372m I 0.678
Pavir.Ib03119 Panicum virgatum Pavir.Ib03119 I 0.678
GSMUA_Achr6G32030_001 Musa acuminata GSMUA_Achr6G32030_001 I 0.677
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.677
MDP0000167207 Malus domestica MDP0000167207 I 0.677
MDP0000127134 Malus domestica MDP0000127134 I 0.677
Lus10033885.g Linum usitatissimum Lus10033885.g I 0.677
Solyc04g014530.1 Solanum lycopersicum Solyc04g014530.1 I 0.677
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.677
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.677
MDP0000235313 Malus domestica MDP0000235313 I 0.677
PGSC0003DMG400023619 Solanum tuberosum PGSC0003DMG400023619 I 0.677
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.677
Ca_23170 Cicer arietinum Ca_23170 I 0.677
Solyc11g006050.1 Solanum lycopersicum Solyc11g006050.1 I 0.677
Pm009382 Prunus mume Pm009382 I 0.677
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.677
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.677
Lus10003562.g Linum usitatissimum Lus10003562.g I 0.677
Pm020604 Prunus mume Pm020604 I 0.677
Cla006080 Citrullus lanatus Cla006080 I 0.677