POPTR_0008s07360 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0008s07360 T004676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.769 0.918
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.723 0.857
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.696 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.696 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.696 0.816
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.690 0.816
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.688 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s07360.1 AP2 78 129

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.805
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.803
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.803
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.803
29729.m002292 Ricinus communis 29729.m002292 I 0.795
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.785
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.785
PK07402.1 Cannabis sativa PK07402.1 D 0.769
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.767
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.767
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.762
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.761
Cla006713 Citrullus lanatus Cla006713 I 0.761
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.758
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.757
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.756
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.755
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.746
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.746
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.743
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.742
Bo4g190040 Brassica oleracea Bo4g190040 I 0.742
Bra017011 Brassica rapa Bra017011 I 0.742
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.741
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.741
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.740
Pm015262 Prunus mume Pm015262 I 0.740
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.740
TCM_043275 Theobroma cacao TCM_043275 I 0.739
MDP0000290585 Malus domestica MDP0000290585 I 0.736
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.733
MDP0000153866 Malus domestica MDP0000153866 I 0.731
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.731
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.731
MDP0000147009 Malus domestica MDP0000147009 I 0.730
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.730
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.730
MDP0000446783 Malus domestica MDP0000446783 I 0.730
MDP0000165880 Malus domestica MDP0000165880 I 0.729
Pm018989 Prunus mume Pm018989 I 0.728
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.728
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.725
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.724
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.724
TCM_043302 Theobroma cacao TCM_043302 I 0.724
TCM_043306 Theobroma cacao TCM_043306 I 0.724
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.723
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.723
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.723
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.723
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.723
F775_05774 Aegilops tauschii F775_05774 I 0.723
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.723
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.722
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.721
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.721
Pm003634 Prunus mume Pm003634 I 0.719
OB01G13930 Oryza brachyantha OB01G13930 I 0.718
OBART01G04210 Oryza barthii OBART01G04210 I 0.718
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.718
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.718
DREB2A Oryza sativa OS01G0165000 I 0.718
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.718
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.718
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.718
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.718
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.718
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.718
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.715
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.714
MDP0000250924 Malus domestica MDP0000250924 I 0.713
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.712
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.711
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.711
MDP0000880312 Malus domestica MDP0000880312 I 0.710
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.710
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.710
Si002067m.g Setaria italica Si002067m.g I 0.710
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.709
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.709
Ca_12446 Cicer arietinum Ca_12446 I 0.708
mgf007881m Mimulus guttatus mgf007881m I 0.707
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.707
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.707
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.707
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.706
MDP0000250927 Malus domestica MDP0000250927 I 0.705
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.705
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.705
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.703
Pm006274 Prunus mume Pm006274 I 0.703
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.703
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.703
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.703
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.703
Ca_10770 Cicer arietinum Ca_10770 I 0.703
Cla001755 Citrullus lanatus Cla001755 I 0.703
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.703
Bo2g083920 Brassica oleracea Bo2g083920 I 0.701
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.701
Bra008200 Brassica rapa Bra008200 I 0.701
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.700
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.700
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.700
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.700
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.700
Cla021113 Citrullus lanatus Cla021113 I 0.700
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.700
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.698
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.698
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.698
mgf017629m Mimulus guttatus mgf017629m I 0.698
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.697
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.696
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.696
DREB2D Arabidopsis thaliana AT1G75490 D 0.696
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.696
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.696
Bra015840 Brassica rapa Bra015840 I 0.696
Bra003752 Brassica rapa Bra003752 I 0.696
Bo6g119660 Brassica oleracea Bo6g119660 I 0.696
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.696
Bo6g086320 Brassica oleracea Bo6g086320 I 0.696
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.696
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.696
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.695
30170.m014115 Ricinus communis 30170.m014115 I 0.695
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.695
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.695
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.695
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.694
mgf024545m Mimulus guttatus mgf024545m I 0.694
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.693
Cla012194 Citrullus lanatus Cla012194 I 0.693
Bo9g177130 Brassica oleracea Bo9g177130 I 0.693
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.693
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.693
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.692
MDP0000141335 Malus domestica MDP0000141335 I 0.691
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.691
MDP0000295902 Malus domestica MDP0000295902 I 0.691
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.691
F775_32062 Aegilops tauschii F775_32062 I 0.691
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.691
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.691
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.690
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.690
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.690
TCM_034132 Theobroma cacao TCM_034132 I 0.690
PK07829.1 Cannabis sativa PK07829.1 I 0.690
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.690
Bo9g155940 Brassica oleracea Bo9g155940 I 0.688
DREB2G Arabidopsis thaliana AT5G18450 D 0.688
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.688
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.688
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.688
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.688
Si022619m.g Setaria italica Si022619m.g I 0.688
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.688
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.688
Bra002159 Brassica rapa Bra002159 I 0.688
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.688
Cla022803 Citrullus lanatus Cla022803 I 0.687
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.687
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.686
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.686
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.686
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.684
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.683
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.683
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.683
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.681
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.680
Ca_22585 Cicer arietinum Ca_22585 I 0.680
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.679
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.678