CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0016s02010
(
Populus trichocarpa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
POPTR_0016s02010
T004734_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0016s02010.1
AP2
48
99
RAFRGVRRRSSGKWVSEIREPKKPNRIWLGTFPNPEMAAVAYDVAALALKGQ
Links
Other
AP2
family TFs
Other
Populus trichocarpa
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0006s02180
Populus trichocarpa
POPTR_0006s02180
N
0.755
SapurV1A.0154s0220
Salix purpurea
SapurV1A.0154s0220
N
0.751
HRD
Vitis vinifera
VIT_08s0007g03810
N
0.732
Lus10014376.g
Linum usitatissimum
Lus10014376.g
N
0.731
Lus10023873.g
Linum usitatissimum
Lus10023873.g
N
0.731
29092.m000462
Ricinus communis
29092.m000462
N
0.728
MDP0000195376
Malus domestica
MDP0000195376
N
0.725
LjSGA_035548.1
Lotus japonicus
LjSGA_035548.1
N
0.723
GLYMA03G34970
Glycine max
GLYMA03G34970
N
0.700
GLYMA19G37670
Glycine max
GLYMA19G37670
N
0.700
GLYMA15G02900
Glycine max
GLYMA15G02900
N
0.700
MDP0000833641
Malus domestica
MDP0000833641
N
0.694
Aquca_027_00393
Aquilegia coerulea
Aquca_027_00393
N
0.692
cassava32861.m1
Manihot esculenta
cassava32861.m1
N
0.692
evm.TU.supercontig_5.71
Carica papaya
evm.TU.supercontig_5.71
N
0.691
PRUPE_ppa020711mg
Prunus persica
PRUPE_ppa020711mg
N
0.690
GLYMA10G07740
Glycine max
GLYMA10G07740
N
0.689
GLYMA13G21560
Glycine max
GLYMA13G21560
N
0.689
Gorai.002G159400
Gossypium raimondii
Gorai.002G159400
N
0.687
Ca_00768
Cicer arietinum
Ca_00768
N
0.687
Pm026227
Prunus mume
Pm026227
N
0.686
cassava21723.m1
Manihot esculenta
cassava21723.m1
N
0.685
gene30159-v1.0-hybrid
Fragaria vesca
gene30159-v1.0-hybrid
N
0.679
Cucsa.083150
Cucumis sativus
Cucsa.083150
N
0.677