POPTR_0019s13330 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0019s13330 T004760_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.808 0.920
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.808 0.920
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.792 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s13330.1 AP2 230 281

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

427 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1Q1_01726 Trichosporon asahii A1Q1_01726 N 0.000
A1Q1_05146 Trichosporon asahii A1Q1_05146 N 0.000
AGABI2DRAFT_182403 Agaricus bisporus AGABI2DRAFT_182403 N 0.000
BOTBODRAFT_37155 Botryobasidium botryosum BOTBODRAFT_37155 N 0.000
BOTBODRAFT_37156 Botryobasidium botryosum BOTBODRAFT_37156 N 0.000
BOTBODRAFT_71140 Botryobasidium botryosum BOTBODRAFT_71140 N 0.000
CERSUDRAFT_110542 Ceriporiopsis subvermispora CERSUDRAFT_110542 N 0.000
CNM01580 Cryptococcus neoformans CNM01580 N 0.000
CY34DRAFT_289505 Suillus luteus CY34DRAFT_289505 N 0.000
DACRYDRAFT_84104 Dacryopinax sp DACRYDRAFT_84104 N 0.000
estExt_fgeneshTM_pg.C_10641 Tremella mesenterica estExt_fgeneshTM_pg.C_10641 N 0.000
estExt_fgeneshTM_pg.C_50362 Tremella mesenterica estExt_fgeneshTM_pg.C_50362 N 0.000
EuGene1000576 Heterobasidion annosum EuGene1000576 N 0.000
GALMADRAFT_233709 Galerina marginata GALMADRAFT_233709 N 0.000
GLOTRDRAFT_135357 Gloeophyllum trabeum GLOTRDRAFT_135357 N 0.000
HETIRDRAFT_377690 Heterobasidion irregulare HETIRDRAFT_377690 N 0.000
JAAARDRAFT_148211 Jaapia argillacea JAAARDRAFT_148211 N 0.000
L804_05452 Cryptococcus gattii L804_05452 N 0.000
M378DRAFT_194984 Amanita muscaria M378DRAFT_194984 N 0.000
M407DRAFT_245661 Tulasnella calospora M407DRAFT_245661 N 0.000
M408DRAFT_94738 Serendipita vermifera M408DRAFT_94738 N 0.000
M413DRAFT_439801 Hebeloma cylindrosporum M413DRAFT_439801 N 0.000
Moror_1763 Moniliophthora roreri Moror_1763 N 0.000
PAXRUDRAFT_30764 Paxillus rubicundulus PAXRUDRAFT_30764 N 0.000
PHACADRAFT_256950 Phanerochaete carnosa PHACADRAFT_256950 N 0.000
PHLGIDRAFT_107482 Phlebiopsis gigantea PHLGIDRAFT_107482 N 0.000
PHLGIDRAFT_180507 Phlebiopsis gigantea PHLGIDRAFT_180507 N 0.000
PILCRDRAFT_611893 Piloderma croceum PILCRDRAFT_611893 N 0.000
PILCRDRAFT_813552 Piloderma croceum PILCRDRAFT_813552 N 0.000
SCHCODRAFT_104061 Schizophyllum commune SCHCODRAFT_104061 N 0.000
SERLA73DRAFT_84116 Serpula lacrymans SERLA73DRAFT_84116 N 0.000
V565_007950 Rhizoctonia solani V565_007950 N 0.000
V565_049440 Rhizoctonia solani V565_049440 N 0.000
V565_051410 Rhizoctonia solani V565_051410 N 0.000
V565_081200 Rhizoctonia solani V565_081200 N 0.000