POPTR_0019s13330 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0019s13330 T004760_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.808 0.920
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.808 0.920
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.792 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s13330.1 AP2 230 281

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

427 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
FFUJ_01049 Fusarium fujikuroi FFUJ_01049 N 0.000
estExt_fgenesh3_pm.C_70293 Neurospora discreta estExt_fgenesh3_pm.C_70293 N 0.000
VHEMI06276 Torrubiella hemipterigena VHEMI06276 N 0.000
UV8b_8109 Ustilaginoidea virens UV8b_8109 N 0.000
THITE_2120935 Thielavia terrestris THITE_2120935 N 0.000
SMAC_02969 Sordaria macrospora SMAC_02969 N 0.000
S40288_03882 Stachybotrys chartarum S40288_03882 N 0.000
NEUTE1DRAFT_126043 Neurospora tetrasperma NEUTE1DRAFT_126043 N 0.000
NechaG31799 Fusarium solani NechaG31799 N 0.000
MYCTH_2294181 Myceliophthora thermophila MYCTH_2294181 N 0.000
MANI_109591 Metarhizium anisopliae MANI_109591 N 0.000
MAC_03004 Metarhizium acridum MAC_03004 N 0.000
FPSE_04438 Fusarium pseudograminearum FPSE_04438 N 0.000
FGRRES_15750 Fusarium graminearum FGRRES_15750 N 0.000
NCU03248 Neurospora crassa NCU03248 N 0.000