CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0019s13330
(
Populus trichocarpa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
POPTR_0019s13330
T004760_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.808
0.920
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.808
0.920
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.792
0.880
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0019s13330.1
AP2
230
281
KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDNAEDAALAYDREAFKLRGE
Links
Other
AP2
family TFs
Other
Populus trichocarpa
TFs
427 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_01049
Fusarium fujikuroi
FFUJ_01049
N
0.000
estExt_fgenesh3_pm.C_70293
Neurospora discreta
estExt_fgenesh3_pm.C_70293
N
0.000
VHEMI06276
Torrubiella hemipterigena
VHEMI06276
N
0.000
UV8b_8109
Ustilaginoidea virens
UV8b_8109
N
0.000
THITE_2120935
Thielavia terrestris
THITE_2120935
N
0.000
SMAC_02969
Sordaria macrospora
SMAC_02969
N
0.000
S40288_03882
Stachybotrys chartarum
S40288_03882
N
0.000
NEUTE1DRAFT_126043
Neurospora tetrasperma
NEUTE1DRAFT_126043
N
0.000
NechaG31799
Fusarium solani
NechaG31799
N
0.000
MYCTH_2294181
Myceliophthora thermophila
MYCTH_2294181
N
0.000
MANI_109591
Metarhizium anisopliae
MANI_109591
N
0.000
MAC_03004
Metarhizium acridum
MAC_03004
N
0.000
FPSE_04438
Fusarium pseudograminearum
FPSE_04438
N
0.000
FGRRES_15750
Fusarium graminearum
FGRRES_15750
N
0.000
NCU03248
Neurospora crassa
NCU03248
N
0.000