Sb01g045040 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb01g045040 T004946_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.709 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g045040.1 AP2 95 146

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G72450 Brachypodium distachyon BRADI1G72450 I 0.785
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.780
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.765
Si036118m.g Setaria italica Si036118m.g I 0.765
Pavir.Ib00528 Panicum virgatum Pavir.Ib00528 I 0.747
Pavir.Ia04158 Panicum virgatum Pavir.Ia04158 I 0.737
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.730
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.725
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.723
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.719
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.719
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.719
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.719
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.719
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.719
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.717
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.717
MDP0000322279 Malus domestica MDP0000322279 I 0.717
OPUNC03G05900 Oryza punctata OPUNC03G05900 I 0.716
TCM_026233 Theobroma cacao TCM_026233 I 0.716
OMERI03G05920 Oryza meridionalis OMERI03G05920 I 0.715
OGLUM03G06100 Oryza glumaepatula OGLUM03G06100 I 0.715
OBART03G06100 Oryza barthii OBART03G06100 I 0.715
ONIVA03G06110 Oryza nivara ONIVA03G06110 I 0.715
ORGLA03G0058900 Oryza glaberrima ORGLA03G0058900 I 0.715
BGIOSGA011326 Oryza indica BGIOSGA011326 I 0.715
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.715
OS03G0183300 Oryza sativa OS03G0183300 I 0.715
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.715
Ca_07754 Cicer arietinum Ca_07754 I 0.715
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.714
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.714
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.714
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.714
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I 0.714
Ca_12081 Cicer arietinum Ca_12081 I 0.713
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.713
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.713
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.713
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.713
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.712
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.712
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.711
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.711
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.709
MDP0000246808 Malus domestica MDP0000246808 I 0.709
mgf023600m Mimulus guttatus mgf023600m I 0.709
MDP0000447570 Malus domestica MDP0000447570 I 0.709
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.707
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.707
Cla007697 Citrullus lanatus Cla007697 I 0.707
29900.m001561 Ricinus communis 29900.m001561 I 0.706
AC206951.3_FG016 Zea mays AC206951.3_FG016 N 0.706
29895.m000321 Ricinus communis 29895.m000321 I 0.705
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.703
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.703
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.703
Si002845m.g Setaria italica Si002845m.g I 0.703
mgf018693m Mimulus guttatus mgf018693m I 0.703
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.703
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.703
TCM_026234 Theobroma cacao TCM_026234 I 0.703
OS01G0313300 Oryza sativa OS01G0313300 I 0.703
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.703
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.703
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.703
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.703
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.703
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.703
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.703
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.703
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.703
Pavir.Ba02374 Panicum virgatum Pavir.Ba02374 I 0.702
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.702
Pavir.Bb00962 Panicum virgatum Pavir.Bb00962 I 0.702
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.702
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.702
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.702
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.700
Cla006080 Citrullus lanatus Cla006080 I 0.699
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.699
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.699
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.699
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.699
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.699
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.698
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N 0.698
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.697
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.697
Ca_23170 Cicer arietinum Ca_23170 I 0.697
MDP0000167207 Malus domestica MDP0000167207 I 0.697
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.697
MDP0000235313 Malus domestica MDP0000235313 I 0.697
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.697
Pm009382 Prunus mume Pm009382 I 0.697
MDP0000127134 Malus domestica MDP0000127134 I 0.697
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.697
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.697
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.697
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.696
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.696
29584.m000234 Ricinus communis 29584.m000234 I 0.695
F775_25471 Aegilops tauschii F775_25471 I 0.695
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.695
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.695
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.695
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.695
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.694
Cla021850 Citrullus lanatus Cla021850 I 0.694
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.694
OPUNC07G10310 Oryza punctata OPUNC07G10310 I 0.694
TCM_004052 Theobroma cacao TCM_004052 I 0.694
TCM_004056 Theobroma cacao TCM_004056 I 0.694
AC233933.1_FG001 Zea mays AC233933.1_FG001 I 0.694
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.694
OBART07G11340 Oryza barthii OBART07G11340 I 0.693
BGIOSGA024428 Oryza indica BGIOSGA024428 I 0.693
OGLUM07G10880 Oryza glumaepatula OGLUM07G10880 I 0.693
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.693
ONIVA07G09500 Oryza nivara ONIVA07G09500 I 0.693
ORGLA07G0097100 Oryza glaberrima ORGLA07G0097100 I 0.693
LPERR07G06830 Leersia perrieri LPERR07G06830 I 0.693
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.693
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.693
OS07G0410700 Oryza sativa OS07G0410700 I 0.693
ORUFI07G11590 Oryza rufipogon ORUFI07G11590 I 0.693
TCM_020871 Theobroma cacao TCM_020871 I 0.692
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.692
Pm020604 Prunus mume Pm020604 I 0.692
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.690
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.689
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.689
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.689
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.689
MDP0000855671 Malus domestica MDP0000855671 I 0.689
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.689
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.689
Si038911m.g Setaria italica Si038911m.g I 0.689
Lus10021873.g Linum usitatissimum Lus10021873.g I 0.688
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.688
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.688
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.688
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.688
Cucsa.255340 Cucumis sativus Cucsa.255340 I 0.688
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.688
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.687
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.687
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.687
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.687
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.686
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.686
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.685
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.685
MDP0000668122 Malus domestica MDP0000668122 I 0.685
gene06406-v1.0-hybrid Fragaria vesca gene06406-v1.0-hybrid I 0.685
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.684
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.684
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.684
Si031079m.g Setaria italica Si031079m.g I 0.683
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.683
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.683
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.683
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.683
Sb02g042760 Sorghum bicolor Sb02g042760 I 0.683
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.683
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.683
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.683
SapurV1A.0006s0840 Salix purpurea SapurV1A.0006s0840 I 0.682
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.682
SapurV1A.3984s0010 Salix purpurea SapurV1A.3984s0010 I 0.682
mgf023779m Mimulus guttatus mgf023779m I 0.682
MDP0000190237 Malus domestica MDP0000190237 I 0.682
POPTR_0002s04010 Populus trichocarpa POPTR_0002s04010 I 0.682
Cla015066 Citrullus lanatus Cla015066 I 0.681
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.681
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.681
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.681
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.680
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.679
Si018024m.g Setaria italica Si018024m.g I 0.679
Ca_12221 Cicer arietinum Ca_12221 I 0.678
29680.m001678 Ricinus communis 29680.m001678 I 0.678
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.678
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.678
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.678
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.678
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.677
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.677
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.677
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.677
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.677
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.677
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.677
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.677
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.677
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.677
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.677
OS03G0341000 Oryza sativa OS03G0341000 N 0.677
OBART07G26160 Oryza barthii OBART07G26160 N 0.677
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.677
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.677
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.677
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.677
OS07G0674800 Oryza sativa OS07G0674800 N 0.677
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.677
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.677
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.677