Sb02g012630 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb02g012630 T004960_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.779 0.804
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.693 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g012630.1 AP2 173 224

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.868
OB09G27130 Oryza brachyantha OB09G27130 I 0.846
OPUNC09G18690 Oryza punctata OPUNC09G18690 I 0.846
OBART09G20410 Oryza barthii OBART09G20410 I 0.843
LPERR09G16380 Leersia perrieri LPERR09G16380 I 0.843
ONIVA09G20840 Oryza nivara ONIVA09G20840 I 0.843
OGLUM09G21150 Oryza glumaepatula OGLUM09G21150 I 0.843
ORUFI09G22040 Oryza rufipogon ORUFI09G22040 I 0.843
BGIOSGA031313 Oryza indica BGIOSGA031313 I 0.843
OS09G0572000 Oryza sativa OS09G0572000 I 0.843
OLONG_005597 Oryza longistaminata OLONG_005597 I 0.843
Pavir.J37124 Panicum virgatum Pavir.J37124 I 0.842
Si031946m.g Setaria italica Si031946m.g I 0.839
Pavir.Ba02781 Panicum virgatum Pavir.Ba02781 I 0.839
Si028088m.g Setaria italica Si028088m.g I 0.814
BRADI4G38930 Brachypodium distachyon BRADI4G38930 I 0.812
Traes_4AS_9450AD3F4 Triticum aestivum Traes_4AS_9450AD3F4 I 0.812
TRIUR3_16508 Triticum urartu TRIUR3_16508 I 0.812
MLOC_43207 Hordeum vulgare MLOC_43207 I 0.812
Si027485m.g Setaria italica Si027485m.g I 0.805
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.805
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.805
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.805
Pavir.Bb00653 Panicum virgatum Pavir.Bb00653 I 0.802
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.801
Pavir.Bb00652 Panicum virgatum Pavir.Bb00652 I 0.801
Traes_4DS_9C01B536B Triticum aestivum Traes_4DS_9C01B536B I 0.800
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.796
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.793
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.790
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.788
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.788
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.781
ERF094 Arabidopsis thaliana AT1G06160 D 0.779
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.779
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.779
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.778
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.778
F775_22020 Aegilops tauschii F775_22020 I 0.772
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.772
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.772
Gorai.001G253000 Gossypium raimondii Gorai.001G253000 I 0.771
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.770
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.768
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.768
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.768
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.768
F775_52314 Aegilops tauschii F775_52314 I 0.768
Pavir.J01078 Panicum virgatum Pavir.J01078 I 0.766
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.764
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.762
Cucsa.255340 Cucumis sativus Cucsa.255340 I 0.762
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.762
Cla006080 Citrullus lanatus Cla006080 I 0.761
Ca_12221 Cicer arietinum Ca_12221 I 0.761
Si028219m.g Setaria italica Si028219m.g I 0.759
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.759
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.759
Cla021850 Citrullus lanatus Cla021850 I 0.759
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.759
Si028135m.g Setaria italica Si028135m.g I 0.759
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.758
Sb05g026843 Sorghum bicolor Sb05g026843 I 0.758
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.757
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.757
MDP0000235313 Malus domestica MDP0000235313 I 0.756
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.756
MDP0000167207 Malus domestica MDP0000167207 I 0.756
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.756
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.756
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.756
Cla007697 Citrullus lanatus Cla007697 I 0.756
Ca_23170 Cicer arietinum Ca_23170 I 0.756
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.756
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.756
MDP0000127134 Malus domestica MDP0000127134 I 0.756
Pm009382 Prunus mume Pm009382 I 0.756
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.756
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.756
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.756
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.755
29895.m000321 Ricinus communis 29895.m000321 I 0.754
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.753
Gorai.013G186800 Gossypium raimondii Gorai.013G186800 I 0.753
TCM_004052 Theobroma cacao TCM_004052 I 0.752
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.751
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.751
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.749
TCM_020871 Theobroma cacao TCM_020871 I 0.749
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.749
MDP0000855671 Malus domestica MDP0000855671 I 0.748
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.748
Pm020604 Prunus mume Pm020604 I 0.748
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.748
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.748
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.747
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.747
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.746
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.746
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.746
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.744
GLYMA02G00870 Glycine max GLYMA02G00870 I 0.744
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.744
MTR_7g096830 Medicago truncatula MTR_7g096830 I 0.743
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.740
GLYMA19G34670 Glycine max GLYMA19G34670 I 0.739
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.738
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.738
VIT_07s0005g03270 Vitis vinifera VIT_07s0005g03270 I 0.737
MTR_1g069985 Medicago truncatula MTR_1g069985 I 0.737
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.736
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.736
TRIUR3_29784 Triticum urartu TRIUR3_29784 I 0.735
GLYMA13G18340 Glycine max GLYMA13G18340 I 0.733
F775_22331 Aegilops tauschii F775_22331 I 0.733
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.733
Pavir.J17768 Panicum virgatum Pavir.J17768 I 0.732
Gorai.011G173000 Gossypium raimondii Gorai.011G173000 I 0.732
Cla015066 Citrullus lanatus Cla015066 I 0.731
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.731
TCM_004056 Theobroma cacao TCM_004056 I 0.730
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.730
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.729
29584.m000234 Ricinus communis 29584.m000234 I 0.728
F775_25471 Aegilops tauschii F775_25471 I 0.728
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.728
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.728
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.728
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.727
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.727
Si038911m.g Setaria italica Si038911m.g I 0.726
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.726
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.726
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.726
29900.m001561 Ricinus communis 29900.m001561 I 0.725
mgf023600m Mimulus guttatus mgf023600m I 0.725
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.725
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.724
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.724
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.723
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.723
Bostr.25219s0341 Boechera stricta Bostr.25219s0341 I 0.723
Cagra.1671s0247 Capsella grandiflora Cagra.1671s0247 I 0.723
Si033089m.g Setaria italica Si033089m.g I 0.723
Carubv10010105m.g Capsella rubella Carubv10010105m.g I 0.723
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.723
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.722
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.722
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.721
Bo8g114710 Brassica oleracea Bo8g114710 I 0.720
Bo5g007280 Brassica oleracea Bo5g007280 I 0.720
OBART07G11340 Oryza barthii OBART07G11340 I 0.719
OPUNC07G10310 Oryza punctata OPUNC07G10310 I 0.719
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.719
OGLUM07G10880 Oryza glumaepatula OGLUM07G10880 I 0.719
ORUFI07G11590 Oryza rufipogon ORUFI07G11590 I 0.719
OS07G0410700 Oryza sativa OS07G0410700 I 0.719
ORGLA07G0097100 Oryza glaberrima ORGLA07G0097100 I 0.719
Traes_4BS_591F7718A Triticum aestivum Traes_4BS_591F7718A N 0.719
ONIVA07G09500 Oryza nivara ONIVA07G09500 I 0.719
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.719
BGIOSGA024428 Oryza indica BGIOSGA024428 I 0.719
mgf023779m Mimulus guttatus mgf023779m I 0.718
AC233933.1_FG001 Zea mays AC233933.1_FG001 I 0.716
LPERR07G06830 Leersia perrieri LPERR07G06830 I 0.715
Pavir.Ba02374 Panicum virgatum Pavir.Ba02374 I 0.714
Pavir.Bb00962 Panicum virgatum Pavir.Bb00962 I 0.714
Gorai.010G156600 Gossypium raimondii Gorai.010G156600 I 0.714
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.713
Thhalv10008518m.g Eutrema salsugineum Thhalv10008518m.g I 0.713
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.713
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.713
mgf020623m Mimulus guttatus mgf020623m I 0.712
MTR_1g070015 Medicago truncatula MTR_1g070015 I 0.712
MTR_1g070000 Medicago truncatula MTR_1g070000 I 0.712
MTR_1g070020 Medicago truncatula MTR_1g070020 I 0.712
MTR_1g070045 Medicago truncatula MTR_1g070045 I 0.712
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.711
29680.m001678 Ricinus communis 29680.m001678 I 0.711
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.711
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.711
Bra015478 Brassica rapa Bra015478 I 0.710
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.709
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.709
PK23186.1 Cannabis sativa PK23186.1 I 0.709
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.708
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.708
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.708
Si032815m.g Setaria italica Si032815m.g I 0.707
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.707
ORA59 Arabidopsis lyrata fgenesh2_kg.1__587__AT1G06160.1 I 0.707
Ca_12081 Cicer arietinum Ca_12081 I 0.707
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.707
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.706
BGIOSGA024429 Oryza indica BGIOSGA024429 I 0.706
ORGLA07G0097000 Oryza glaberrima ORGLA07G0097000 I 0.706
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.706
OBART07G11330 Oryza barthii OBART07G11330 I 0.706
ONIVA01G50300 Oryza nivara ONIVA01G50300 I 0.706
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.706
ORUFI07G11580 Oryza rufipogon ORUFI07G11580 I 0.706
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.705
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.705
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.705
mgf021081m Mimulus guttatus mgf021081m I 0.703
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.701
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.701
Sb05g022110 Sorghum bicolor Sb05g022110 I 0.701
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.700
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.700
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.700
Ca_07754 Cicer arietinum Ca_07754 I 0.700
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.700
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.699
MDP0000447570 Malus domestica MDP0000447570 I 0.699
MDP0000246808 Malus domestica MDP0000246808 I 0.699
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.699
MTR_4g054860 Medicago truncatula MTR_4g054860 I 0.697
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.693
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.691
OS03G0150200 Oryza sativa OS03G0150200 I 0.691
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.691
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.691
AMTR_s00021p00184450 Amborella trichopoda AMTR_s00021p00184450 I 0.691
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.691
OBART03G03890 Oryza barthii OBART03G03890 I 0.691
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.691
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.691
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.691
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.691
TCM_026234 Theobroma cacao TCM_026234 I 0.690
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.690
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.690
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.690
Traes_2BS_0EE99D4A6 Triticum aestivum Traes_2BS_0EE99D4A6 I 0.689
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.689
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.689
mgf018693m Mimulus guttatus mgf018693m I 0.688
Traes_2BL_304012B04 Triticum aestivum Traes_2BL_304012B04 N 0.688
Traes_2BL_3A3353970 Triticum aestivum Traes_2BL_3A3353970 N 0.688
Traes_2AL_9E90C2488 Triticum aestivum Traes_2AL_9E90C2488 N 0.688
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.688
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.687
Lus10042907.g Linum usitatissimum Lus10042907.g I 0.686
F775_22648 Aegilops tauschii F775_22648 N 0.686
Pavir.J22854 Panicum virgatum Pavir.J22854 I 0.684
Si039759m.g Setaria italica Si039759m.g I 0.684
Sb01g046920 Sorghum bicolor Sb01g046920 I 0.684
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I 0.684
AC198979.4_FG009 Zea mays AC198979.4_FG009 I 0.684
Lus10021873.g Linum usitatissimum Lus10021873.g I 0.683
Traes_4AL_F18648C49 Triticum aestivum Traes_4AL_F18648C49 I 0.683
MTR_4g054360 Medicago truncatula MTR_4g054360 I 0.682
Bo3g143350 Brassica oleracea Bo3g143350 I 0.681
LjSGA_091069.2 Lotus japonicus LjSGA_091069.2 I 0.681
Bra010880 Brassica rapa Bra010880 I 0.681
chr1.CM0295.160.nd Lotus japonicus chr1.CM0295.160.nd I 0.681
F775_01237 Aegilops tauschii F775_01237 N 0.681
GRMZM2G024871 Zea mays GRMZM2G024871 I 0.681
Si039310m.g Setaria italica Si039310m.g I 0.681
LPERR10G08470 Leersia perrieri LPERR10G08470 I 0.681
Sb01g020555 Sorghum bicolor Sb01g020555 I 0.681
orange1.1g043029m.g Citrus sinensis orange1.1g043029m.g I 0.680
Ciclev10023352m.g Citrus clementina Ciclev10023352m.g I 0.680
SELMODRAFT_37123 Selaginella moellendorffii SELMODRAFT_37123 I 0.680
SELMODRAFT_80895 Selaginella moellendorffii SELMODRAFT_80895 I 0.680
chr5.CM0494.330.nc Lotus japonicus chr5.CM0494.330.nc I 0.679
chr5.CM0494.320.nc Lotus japonicus chr5.CM0494.320.nc I 0.679
MDP0000322279 Malus domestica MDP0000322279 I 0.678
evm.TU.supercontig_101.16 Carica papaya evm.TU.supercontig_101.16 I 0.677
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.677
Bra032433 Brassica rapa Bra032433 I 0.677