Sb03g004980 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb03g004980 T004978_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.749 0.878
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.732 0.878
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.695 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g004980.1 AP2 81 132

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.786
Si002067m.g Setaria italica Si002067m.g I 0.782
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.778
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.778
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.778
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.778
OB01G13930 Oryza brachyantha OB01G13930 I 0.778
DREB2A Oryza sativa OS01G0165000 I 0.778
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.778
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.778
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.778
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.778
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.778
OBART01G04210 Oryza barthii OBART01G04210 I 0.778
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.776
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.770
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.749
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.749
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.749
F775_05774 Aegilops tauschii F775_05774 I 0.749
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.749
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.749
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.746
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.743
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.740
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.735
PK07402.1 Cannabis sativa PK07402.1 D 0.732
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.726
29729.m002292 Ricinus communis 29729.m002292 I 0.725
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.724
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.723
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.723
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.723
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.722
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.722
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.721
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.716
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.716
MDP0000153866 Malus domestica MDP0000153866 I 0.715
Cla006713 Citrullus lanatus Cla006713 I 0.715
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.712
PK07829.1 Cannabis sativa PK07829.1 I 0.712
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.712
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.711
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.709
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.709
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.707
Pm018989 Prunus mume Pm018989 I 0.706
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.706
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.705
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.704
MDP0000165880 Malus domestica MDP0000165880 I 0.704
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.703
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.701
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.701
MDP0000880312 Malus domestica MDP0000880312 I 0.699
MDP0000446783 Malus domestica MDP0000446783 I 0.698
MDP0000147009 Malus domestica MDP0000147009 I 0.698
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.697
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.697
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.695
Bo9g155940 Brassica oleracea Bo9g155940 I 0.695
DREB2G Arabidopsis thaliana AT5G18450 D 0.695
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.695
Bra002159 Brassica rapa Bra002159 I 0.695
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.695
Bo9g177130 Brassica oleracea Bo9g177130 I 0.694
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.694
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.693
Bo4g190040 Brassica oleracea Bo4g190040 I 0.691
Bra017011 Brassica rapa Bra017011 I 0.691
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.690
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.690
MDP0000290585 Malus domestica MDP0000290585 I 0.690
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.690
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.690
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.690
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.689
Pm015262 Prunus mume Pm015262 I 0.689
mgf017629m Mimulus guttatus mgf017629m I 0.688
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.687
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.685
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.685
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.683
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.683
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.683
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.681
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.678
TCM_043306 Theobroma cacao TCM_043306 I 0.677
TCM_043302 Theobroma cacao TCM_043302 I 0.677