Sb04g036020 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb04g036020 T005008_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.842 0.941
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.842 0.941
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.722 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb04g036020.1 AP2 6 57

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

293 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
E4F1 Pteropus vampyrus ENSPVAG00000005098 I 0.000
E4F1 Myotis lucifugus ENSMLUG00000016786 I 0.000
E4F1 Macaca mulatta ENSMMUG00000019235 I 0.000
E4F1 Tursiops truncatus ENSTTRG00000008208 I 0.000
E4F1 Sus scrofa ENSSSCG00000008047 I 0.000
E4F1 Oryctolagus cuniculus ENSOCUG00000025484 I 0.000
E4F1 Otolemur garnettii ENSOGAG00000006594 I 0.000
E4F1 Ochotona princeps ENSOPRG00000002573 I 0.000
E4f1 Rattus norvegicus ENSRNOG00000009224 I 0.000
E4F1 Procavia capensis ENSPCAG00000004337 I 0.000
E4F1 Microcebus murinus ENSMICG00000005892 I 0.000
E4F1 Loxodonta africana ENSLAFG00000000725 I 0.000
E4F1 Bos taurus ENSBTAG00000009961 I 0.000
E4F1 Callithrix jacchus ENSCJAG00000015000 I 0.000
E4F1 Cavia porcellus ENSCPOG00000002052 I 0.000
E4F1 Dasypus novemcinctus ENSDNOG00000016503 I 0.000
E4f1 Dipodomys ordii ENSDORG00000001751 I 0.000
E4F1 Equus caballus ENSECAG00000008036 I 0.000
E4F1 Homo sapiens ENSG00000167967 D 0.000
E4F1 Gorilla gorilla ENSGGOG00000014241 I 0.000
ENSAMEG00000017837 Ailuropoda melanoleuca ENSAMEG00000017837 I 0.000
ENSCSAG00000010850 Chlorocebus sabaeus ENSCSAG00000010850 I 0.000
ENSMPUG00000015378 Mustela putorius furo ENSMPUG00000015378 I 0.000
ENSNLEG00000009261 Nomascus leucogenys ENSNLEG00000009261 I 0.000
ENSOARG00000017910 Ovis aries ENSOARG00000017910 I 0.000
ENSP00000301727 Macaca fascicularis ENSP00000301727 I 0.000
ENSP00000301727-D1 Bos grunniens ENSP00000301727-D1 I 0.000
ENSPANG00000017016 Papio anubis ENSPANG00000017016 I 0.000
ENSSTOG00000013171 Ictidomys tridecemlineatus ENSSTOG00000013171 I 0.000
Myotis_brandtii_E4f1_10005619 Myotis brandtii Myotis_brandtii_E4f1_10005619 I 0.000