Sb05g006275 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb05g006275 T005012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M09710_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_01 		0.843 0.906
DREB1A
M09711_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SED_Q2 		0.843 0.906
Q8GZQ2_MAIZE
M09720_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_02 		0.743 0.811
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb05g006275.1 AP2 33 86

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si031001m.g Setaria italica Si031001m.g I 0.891
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.891
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.891
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.885
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.881
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.875
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.867
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.865
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.862
Si030998m.g Setaria italica Si030998m.g I 0.847
Pavir.J03891 Panicum virgatum Pavir.J03891 I 0.847
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.846
OPUNC09G15290 Oryza punctata OPUNC09G15290 I 0.843
DREB1A Oryza sativa OS09G0522200 D 0.843
ONIVA09G17900 Oryza nivara ONIVA09G17900 I 0.843
ORUFI09G18210 Oryza rufipogon ORUFI09G18210 I 0.843
DREB1A Oryza indica BGIOSGA029415 I 0.843
OBART09G16810 Oryza barthii OBART09G16810 I 0.843
OMERI09G12490 Oryza meridionalis OMERI09G12490 I 0.843
OGLUM09G17430 Oryza glumaepatula OGLUM09G17430 I 0.843
Pavir.Ba01280 Panicum virgatum Pavir.Ba01280 I 0.842
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.838
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.835
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.822
F775_27111 Aegilops tauschii F775_27111 I 0.813
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.813
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.809
OBART09G16830 Oryza barthii OBART09G16830 I 0.767
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.747
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.743
GRMZM2G069082 Zea mays GRMZM2G069082 I 0.741
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.738
Pavir.Fb02246 Panicum virgatum Pavir.Fb02246 I 0.728
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I 0.712
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.710
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.710
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.704
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.704
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.699
Sb02g030300 Sorghum bicolor Sb02g030300 I 0.689
Traes_5BL_0C3609EF0 Triticum aestivum Traes_5BL_0C3609EF0 N 0.682
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.681
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.681
F775_19112 Aegilops tauschii F775_19112 N 0.678