Sb07g022265 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb07g022265 T005042_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.677 0.800
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.677 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb07g022265.1 AP2 22 73

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.764
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.764
OBART08G16950 Oryza barthii OBART08G16950 I 0.764
OB08G24280 Oryza brachyantha OB08G24280 I 0.764
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.764
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.764
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.764
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.764
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.764
OS08G0454000 Oryza sativa OS08G0454000 I 0.764
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.764
Si015027m.g Setaria italica Si015027m.g I 0.764
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.764
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.764
F775_23111 Aegilops tauschii F775_23111 I 0.761
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.755
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.718
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.717
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.715
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.705
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.705
Si008104m.g Setaria italica Si008104m.g I 0.704
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.701
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.701
Cla011318 Citrullus lanatus Cla011318 I 0.695
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.695
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.695
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.693
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.692
Bra016518 Brassica rapa Bra016518 I 0.691
Bo8g068370 Brassica oleracea Bo8g068370 I 0.691
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.691
Si019636m.g Setaria italica Si019636m.g I 0.691
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.688
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.686
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.686
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.686
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.686
TCM_037415 Theobroma cacao TCM_037415 I 0.686
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.685
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.685
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.685
TCM_037486 Theobroma cacao TCM_037486 I 0.685
Pm027117 Prunus mume Pm027117 I 0.685
29739.m003716 Ricinus communis 29739.m003716 I 0.685
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.685
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.683
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.681
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.680
Bo8g102870 Brassica oleracea Bo8g102870 I 0.680
Bra031069 Brassica rapa Bra031069 I 0.680
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.680
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.680
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.679
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.679
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.677
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.677
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.677
ERF017 Arabidopsis thaliana AT1G19210 D 0.677
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.677