Sb07g023575 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb07g023575 T005044_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.692 0.816
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.692 0.816
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.692 0.816
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.690 0.776
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.680 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb07g023575.1 AP2 87 138

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30170.m014115 Ricinus communis 30170.m014115 I 0.685
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.718
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.718
Bo2g083920 Brassica oleracea Bo2g083920 I 0.693
Bo6g086320 Brassica oleracea Bo6g086320 I 0.689
Bo6g119660 Brassica oleracea Bo6g119660 I 0.692
Bo9g155940 Brassica oleracea Bo9g155940 I 0.690
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.690
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.692
Bra002159 Brassica rapa Bra002159 I 0.690
Bra003752 Brassica rapa Bra003752 I 0.689
Bra008200 Brassica rapa Bra008200 I 0.693
Bra015840 Brassica rapa Bra015840 I 0.692
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.708
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.694
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.692
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.694
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.692
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.685
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.682
Ca_10770 Cicer arietinum Ca_10770 I 0.681
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.685
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.690
Cla006713 Citrullus lanatus Cla006713 I 0.682
Cla021113 Citrullus lanatus Cla021113 I 0.683
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.683
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.685
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.694
DREB2C Oryza sativa OS08G0565200 I 0.718
DREB2D Arabidopsis thaliana AT1G75490 D 0.692
DREB2G Arabidopsis thaliana AT5G18450 D 0.690
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.691
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.695
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.684
F775_01779 Aegilops tauschii F775_01779 I 0.723
F775_02345 Aegilops tauschii F775_02345 I 0.712
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.692
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.688
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.706
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.681
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.681
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.686
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.686
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.686
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.693
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.686
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.698
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.776
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.776
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.677
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.746
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.682
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.735
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.682
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.700
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.681
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.677
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.729
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.684
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.697
MDP0000141335 Malus domestica MDP0000141335 I 0.681
MDP0000250924 Malus domestica MDP0000250924 I 0.689
MDP0000250927 Malus domestica MDP0000250927 I 0.694
MDP0000295902 Malus domestica MDP0000295902 I 0.681
mgf017629m Mimulus guttatus mgf017629m I 0.719
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.709
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.712
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.681
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.691
OB08G30790 Oryza brachyantha OB08G30790 I 0.718
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.718
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.718
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.718
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.718
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.690
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.685
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.718
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.718
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.712
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.712
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.679
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.684
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.719
PK07402.1 Cannabis sativa PK07402.1 D 0.680
Pm003634 Prunus mume Pm003634 I 0.700
Pm006274 Prunus mume Pm006274 I 0.685
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.683
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.685
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.686
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.686
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.704
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.686
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.690
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.685
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.685
Si002067m.g Setaria italica Si002067m.g I 0.679
Si024059m.g Setaria italica Si024059m.g I 0.712
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.719
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.684
TCM_034132 Theobroma cacao TCM_034132 I 0.682
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.690
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.691
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.692
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.692
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.718
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.712
TRIUR3_03342 Triticum urartu TRIUR3_03342 N 0.684
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.683
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.686