Sb10g006980 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb10g006980 T005072_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.767 0.880
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.754 0.840
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.734 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g006980.1 AP2 30 81

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si007977m.g Setaria italica Si007977m.g I 0.790
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.790
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.790
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.789
F775_20580 Aegilops tauschii F775_20580 I 0.787
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.786
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.768
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.768
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.768
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.768
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.768
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.768
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.768
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.768
OS02G0767800 Oryza sativa OS02G0767800 I 0.768
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.768
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.768
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.767
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.767
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.767
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.767
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.767
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.767
TCM_035077 Theobroma cacao TCM_035077 I 0.767
Cla014165 Citrullus lanatus Cla014165 I 0.767
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.767
29908.m006165 Ricinus communis 29908.m006165 I 0.767
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.767
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.767
mgf021045m Mimulus guttatus mgf021045m I 0.767
Ca_25824 Cicer arietinum Ca_25824 I 0.767
Pm004870 Prunus mume Pm004870 I 0.767
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.767
Bra040309 Brassica rapa Bra040309 I 0.767
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.767
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.767
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.767
MDP0000120147 Malus domestica MDP0000120147 I 0.767
MDP0000923690 Malus domestica MDP0000923690 I 0.767
ERF014 Arabidopsis thaliana AT1G44830 D 0.767
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.767
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.767
Bo6g004620 Brassica oleracea Bo6g004620 I 0.767
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.767
F775_17148 Aegilops tauschii F775_17148 I 0.767
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.767
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.767
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.767
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.767
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.767
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.767
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.767
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.767
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.764
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.764
Cla023512 Citrullus lanatus Cla023512 I 0.764
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.764
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.762
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.762
Bra015660 Brassica rapa Bra015660 I 0.762
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.762
Bo6g121400 Brassica oleracea Bo6g121400 I 0.762
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.761
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.761
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.761
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.761
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.758
mgf023290m Mimulus guttatus mgf023290m I 0.757
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.757
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.755
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.754
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.754
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.754
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.754
ERF012 Arabidopsis thaliana AT1G21910 D 0.754
Bra036022 Brassica rapa Bra036022 I 0.754
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.754
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.754
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.754
Bo5g034880 Brassica oleracea Bo5g034880 I 0.753
GRMZM2G084264 Zea mays GRMZM2G084264 I 0.752
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.747
Si039170m.g Setaria italica Si039170m.g I 0.747
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.747
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.747
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.747
Bo8g071150 Brassica oleracea Bo8g071150 I 0.744
Bra016400 Brassica rapa Bra016400 I 0.744
MDP0000319736 Malus domestica MDP0000319736 I 0.740
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.739
Bra012298 Brassica rapa Bra012298 I 0.735
ERF013 Arabidopsis thaliana AT1G77640 D 0.734
fgenesh2_kg.2__2058__AT1G77640.1 Arabidopsis lyrata fgenesh2_kg.2__2058__AT1G77640.1 I 0.734
Bostr.20129s0200 Boechera stricta Bostr.20129s0200 I 0.734
PK16069.1 Cannabis sativa PK16069.1 I 0.732
LjT35E05.90.nd Lotus japonicus LjT35E05.90.nd I 0.730
chr1.LjB21G05.120.nc Lotus japonicus chr1.LjB21G05.120.nc I 0.730
Carubv10020777m.g Capsella rubella Carubv10020777m.g I 0.724
Cagra.0096s0069 Capsella grandiflora Cagra.0096s0069 I 0.724
OMERI06G08130 Oryza meridionalis OMERI06G08130 I 0.719
OPUNC06G06600 Oryza punctata OPUNC06G06600 I 0.719
OBART06G07000 Oryza barthii OBART06G07000 I 0.719
ONIVA06G08290 Oryza nivara ONIVA06G08290 I 0.719
OGLUM06G07380 Oryza glumaepatula OGLUM06G07380 I 0.719
BGIOSGA022531 Oryza indica BGIOSGA022531 I 0.719
ORGLA06G0065100 Oryza glaberrima ORGLA06G0065100 I 0.719
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.718
Eucgr.F03772 Eucalyptus grandis Eucgr.F03772 I 0.713
Pavir.J30447 Panicum virgatum Pavir.J30447 I 0.709
Bo7g059990 Brassica oleracea Bo7g059990 I 0.703
BGIOSGA011061 Oryza indica BGIOSGA011061 I 0.696
LPERR03G10190 Leersia perrieri LPERR03G10190 I 0.696
Traes_4BL_762F09E09 Triticum aestivum Traes_4BL_762F09E09 I 0.696
Traes_4DL_FB8B5AAEB Triticum aestivum Traes_4DL_FB8B5AAEB I 0.696
Traes_4AS_18663793B Triticum aestivum Traes_4AS_18663793B I 0.696
ORUFI03G11820 Oryza rufipogon ORUFI03G11820 I 0.696
OS03G0263000 Oryza sativa OS03G0263000 I 0.696
ORGLA03G0110800 Oryza glaberrima ORGLA03G0110800 I 0.696
OPUNC03G11030 Oryza punctata OPUNC03G11030 I 0.696
OBART03G11470 Oryza barthii OBART03G11470 I 0.696
BRADI1G67350 Brachypodium distachyon BRADI1G67350 I 0.696
OGLUM03G11430 Oryza glumaepatula OGLUM03G11430 I 0.696
OMERI03G10750 Oryza meridionalis OMERI03G10750 I 0.696
ONIVA03G12660 Oryza nivara ONIVA03G12660 I 0.696
LjSGA_147935.1 Lotus japonicus LjSGA_147935.1 I 0.693
OB03G21640 Oryza brachyantha OB03G21640 I 0.684