Sb10g025053 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb10g025053 T005077_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.870 1.000
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.822 0.878
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.797 0.827
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.791 0.827
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g025053.1 AP2 114 163
Sb10g025053.1 AP2 206 257

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28752.m000339 Ricinus communis 28752.m000339 I 0.813
29169.m000017 Ricinus communis 29169.m000017 I 0.810
29805.m001494 Ricinus communis 29805.m001494 I 0.820
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.813
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.767
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.809
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.803
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.813
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.791
AP2 Arabidopsis thaliana AT4G36920 I 0.822
TOE3 Arabidopsis thaliana AT5G67180 I 0.771
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.796
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.818
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.813
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.836
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.788
Bo1g004960 Brassica oleracea Bo1g004960 I 0.822
Bo4g070350 Brassica oleracea Bo4g070350 I 0.790
Bo7g064000 Brassica oleracea Bo7g064000 I 0.767
Bo7g118400 Brassica oleracea Bo7g118400 I 0.822
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.771
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.822
Bra011741 Brassica rapa Bra011741 I 0.822
Bra011939 Brassica rapa Bra011939 I 0.790
Bra012139 Brassica rapa Bra012139 I 0.767
Bra017809 Brassica rapa Bra017809 I 0.822
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.805
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.786
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.811
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.817
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.771
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.791
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.822
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.822
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.791
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.771
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.810
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.813
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.766
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.807
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.813
Ca_02499 Cicer arietinum Ca_02499 I 0.813
Ca_09295 Cicer arietinum Ca_09295 I 0.822
Ca_12010 Cicer arietinum Ca_12010 I 0.796
Ca_14618 Cicer arietinum Ca_14618 I 0.801
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.819
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.813
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.754
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.785
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.808
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.770
Cla000716 Citrullus lanatus Cla000716 I 0.821
Cla018124 Citrullus lanatus Cla018124 I 0.807
Cla018549 Citrullus lanatus Cla018549 I 0.730
Cla020549 Citrullus lanatus Cla020549 I 0.743
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.797
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.734
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.821
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.807
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.814
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.787
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.805
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.813
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.797
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.752
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.821
F775_32962 Aegilops tauschii F775_32962 I 0.811
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.771
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.822
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.765
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.805
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.755
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.821
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.812
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.821
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.813
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.813
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.813
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.786
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.821
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.790
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.812
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.821
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.811
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.818
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.818
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.797
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.801
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.870
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.818
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.786
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.757
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.818
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.785
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.812
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.791
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.822
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.821
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.821
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.814
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.796
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.822
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.780
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.794
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.791
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.792
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.817
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.778
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.812
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.787
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.792
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.821
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.806
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.810
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.750
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.833
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.788
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.811
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.814
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.781
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.811
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.789
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.807
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.789
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.749
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.775
MDP0000137561 Malus domestica MDP0000137561 I 0.806
MDP0000163645 Malus domestica MDP0000163645 I 0.783
MDP0000181606 Malus domestica MDP0000181606 I 0.818
MDP0000200319 Malus domestica MDP0000200319 I 0.812
mgf005133m Mimulus guttatus mgf005133m I 0.786
mgf009315m Mimulus guttatus mgf009315m I 0.820
mgf010466m Mimulus guttatus mgf010466m I 0.786
mgf021945m Mimulus guttatus mgf021945m I 0.810
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.804
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.789
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.810
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.789
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.822
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.821
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.796
OB03G45870 Oryza brachyantha OB03G45870 I 0.801
OB06G29960 Oryza brachyantha OB06G29960 I 0.836
OBART07G08110 Oryza barthii OBART07G08110 I 0.788
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.796
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.818
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.836
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.788
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.788
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.750
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.796
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.818
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.836
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.788
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.788
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.796
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.818
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.836
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.796
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.818
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.813
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.835
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.788
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.785
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.813
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.770
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.818
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.813
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.788
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.796
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.818
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.836
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.788
OS03G0818800 Oryza sativa OS03G0818800 I 0.753
OS05G0121600 Oryza sativa OS05G0121600 I 0.813
OS07G0235800 Oryza sativa OS07G0235800 I 0.788
P93632_MAIZE Zea mays P93632_MAIZE D 0.870
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.786
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.856
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.813
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.813
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.785
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.859
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.811
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.785
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.813
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.821
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.821
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.794
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.813
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.816
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.812
PK02403.1 Cannabis sativa PK02403.1 I 0.821
PK07183.1 Cannabis sativa PK07183.1 I 0.811
Pm000974 Prunus mume Pm000974 I 0.818
Pm002492 Prunus mume Pm002492 I 0.812
Pm030172 Prunus mume Pm030172 I 0.805
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.813
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.817
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.821
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.782
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.812
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.805
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.812
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.797
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.822
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.788
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.817
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.812
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.821
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.800
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.785
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.786
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.818
Si006371m.g Setaria italica Si006371m.g I 0.749
Si012635m.g Setaria italica Si012635m.g I 0.818
Si025305m.g Setaria italica Si025305m.g I 0.813
Si029636m.g Setaria italica Si029636m.g I 0.786
Si036068m.g Setaria italica Si036068m.g I 0.785
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.822
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.821
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.822
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.774
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.810
TCM_000665 Theobroma cacao TCM_000665 I 0.818
TCM_022077 Theobroma cacao TCM_022077 I 0.812
TCM_042000 Theobroma cacao TCM_042000 I 0.811
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.783
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.791
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.690
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.811
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.811
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.811
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.703
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.813
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.821
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.812
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.791