SELMODRAFT_131245 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_131245 T005134_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.759 0.780
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.754 0.760
ERF109
M00849_2.00
Arabidopsis thaliana
NGCCGNHNN

NNDNCGGCN
PBM
Franco-Zorrilla et al.(2014)
RRTF1
0.730 0.720
ERF109
M06653_2.00
Arabidopsis thaliana
CKSCGCCGYHWHHNN

NNDDWDRCGGCGSMG
Dap-seq
OMalley et al.(2016)
RRTF1_col_a
0.730 0.720
ERF109
M06654_2.00
Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN

NNNDAWDRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a
0.730 0.720
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.725 0.720
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN

NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.715 0.700
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN

NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.715 0.700
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.711 0.720
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN

NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.709 0.700
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND

HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.709 0.700
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR

YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.709 0.700
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.708 0.740
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.708 0.740
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.708 0.740
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.706 0.680
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.706 0.680
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.706 0.680
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.704 0.700
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.703 0.700
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.692 0.680
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.691 0.700
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.687 0.720
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.687 0.720
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.687 0.720
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN

NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.686 0.700
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN

NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.686 0.700
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.685 0.700
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.683 0.760
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.683 0.760
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.683 0.760
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.683 0.760
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD

HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.683 0.700
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH

DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.683 0.700
CRF4
M01626_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8261
0.682 0.660
CRF4
M06645_2.00
Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN

NRGHDDHDGYGGCGGCGGHKV
Dap-seq
OMalley et al.(2016)
CRF4_col_a
0.682 0.660
CRF4
M06646_2.00
Arabidopsis thaliana
YCDYCGCCGCCGYYD

HRRCGGCGGCGRHGR
Dap-seq
OMalley et al.(2016)
CRF4_colamp_a
0.682 0.660
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.680 0.680
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.680 0.680
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.680 0.680
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ08788 AP2 21 72

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

1006 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK16335.1 Cannabis sativa PK16335.1 D 0.000
AtbZIP52 Arabidopsis thaliana AT1G06850 D 0.000
BZIP18 Arabidopsis thaliana AT2G40620 D 0.000
PK00315.1 Cannabis sativa PK00315.1 D 0.000
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I 0.000
mgf007830m Mimulus guttatus mgf007830m I 0.000
Cucsa.143950 Cucumis sativus Cucsa.143950 I 0.000
Traes_2AS_3B7BE6FDC Triticum aestivum Traes_2AS_3B7BE6FDC I 0.000
Cucsa.118900 Cucumis sativus Cucsa.118900 I 0.000
cassava43674.valid.m1 Manihot esculenta cassava43674.valid.m1 I 0.000
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I 0.000
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I 0.000
Bostr.9345s0072 Boechera stricta Bostr.9345s0072 I 0.000
Cagra.1642s0027 Capsella grandiflora Cagra.1642s0027 I 0.000
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I 0.000
Carubv10009673m.g Capsella rubella Carubv10009673m.g I 0.000
Carubv10025182m.g Capsella rubella Carubv10025182m.g I 0.000
29804.m001495 Ricinus communis 29804.m001495 I 0.000
29729.m002363 Ricinus communis 29729.m002363 I 0.000
Pm019060 Prunus mume Pm019060 I 0.000
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I 0.000
Traes_4AS_45B416B25 Triticum aestivum Traes_4AS_45B416B25 I 0.000
Traes_4BL_9422485B3 Triticum aestivum Traes_4BL_9422485B3 I 0.000
Traes_4DL_19DC0CA31 Triticum aestivum Traes_4DL_19DC0CA31 I 0.000
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I 0.000
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I 0.000
Ca_04108 Cicer arietinum Ca_04108 I 0.000
Ca_08929 Cicer arietinum Ca_08929 I 0.000
Ca_15657 Cicer arietinum Ca_15657 I 0.000
Cla007409 Citrullus lanatus Cla007409 I 0.000
Cla013626 Citrullus lanatus Cla013626 I 0.000
Pm000251 Prunus mume Pm000251 I 0.000
Ciclev10032076m.g Citrus clementina Ciclev10032076m.g I 0.000
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I 0.000
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I 0.000
MDP0000305387 Malus domestica MDP0000305387 I 0.000
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I 0.000
Pavir.Bb03755 Panicum virgatum Pavir.Bb03755 I 0.000
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I 0.000
SapurV1A.0182s0020 Salix purpurea SapurV1A.0182s0020 I 0.000
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I 0.000
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I 0.000
SapurV1A.4004s0010 Salix purpurea SapurV1A.4004s0010 I 0.000
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I 0.000
Thhalv10016819m.g Eutrema salsugineum Thhalv10016819m.g I 0.000
LjSGA_023972.1 Lotus japonicus LjSGA_023972.1 I 0.000
PDK_20s1367981g001 Phoenix dactylifera PDK_20s1367981g001 I 0.000
MDP0000297791 Malus domestica MDP0000297791 I 0.000
MDP0000210251 Malus domestica MDP0000210251 I 0.000
MDP0000129203 Malus domestica MDP0000129203 I 0.000
evm.TU.supercontig_19.62 Carica papaya evm.TU.supercontig_19.62 I 0.000
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I 0.000
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I 0.000
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I 0.000
Gorai.009G293600 Gossypium raimondii Gorai.009G293600 I 0.000
Gorai.010G218700 Gossypium raimondii Gorai.010G218700 I 0.000
Gorai.011G209200 Gossypium raimondii Gorai.011G209200 I 0.000
Lus10008605.g Linum usitatissimum Lus10008605.g I 0.000
Lus10009907.g Linum usitatissimum Lus10009907.g I 0.000
Lus10012881.g Linum usitatissimum Lus10012881.g I 0.000
Lus10030531.g Linum usitatissimum Lus10030531.g I 0.000
Lus10042211.g Linum usitatissimum Lus10042211.g I 0.000
PDK_20s1563121g001 Phoenix dactylifera PDK_20s1563121g001 I 0.000
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I 0.000
GLYMA11G30940 Glycine max GLYMA11G30940 I 0.000
GLYMA14G38460 Glycine max GLYMA14G38460 I 0.000
GLYMA18G05880 Glycine max GLYMA18G05880 I 0.000
GRMZM2G062391 Zea mays GRMZM2G062391 I 0.000
GRMZM2G151295 Zea mays GRMZM2G151295 I 0.000
GSMUA_Achr11G23650_001 Musa acuminata GSMUA_Achr11G23650_001 I 0.000
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I 0.000
GSMUA_Achr5G29650_001 Musa acuminata GSMUA_Achr5G29650_001 I 0.000
GSMUA_AchrUn_randomG14020_001 Musa acuminata GSMUA_AchrUn_randomG14020_001 I 0.000
LPERR03G14390 Leersia perrieri LPERR03G14390 I 0.000
LPERR07G23230 Leersia perrieri LPERR07G23230 I 0.000
MLOC_44311 Hordeum vulgare MLOC_44311 I 0.000
MLOC_51623 Hordeum vulgare MLOC_51623 I 0.000
GLYMA02G40270 Glycine max GLYMA02G40270 I 0.000
fgenesh2_kg.4__2179__AT2G40620.1 Arabidopsis lyrata fgenesh2_kg.4__2179__AT2G40620.1 I 0.000
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I 0.000
BGIOSGA012577 Oryza indica BGIOSGA012577 I 0.000
BGIOSGA023710 Oryza indica BGIOSGA023710 I 0.000
Bo4g012700 Brassica oleracea Bo4g012700 I 0.000
Bo4g190320 Brassica oleracea Bo4g190320 I 0.000
Bo8g007220 Brassica oleracea Bo8g007220 I 0.000
Bo8g114410 Brassica oleracea Bo8g114410 I 0.000
Bra004582 Brassica rapa Bra004582 I 0.000
Bra016980 Brassica rapa Bra016980 I 0.000
Bra030663 Brassica rapa Bra030663 I 0.000
Bra031541 Brassica rapa Bra031541 I 0.000
F775_31774 Aegilops tauschii F775_31774 I 0.000
F775_32183 Aegilops tauschii F775_32183 I 0.000
MLOC_60045 Hordeum vulgare MLOC_60045 I 0.000
MTR_3g094020 Medicago truncatula MTR_3g094020 I 0.000
MTR_3g467120 Medicago truncatula MTR_3g467120 I 0.000
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I 0.000
RF2B Oryza sativa OS03G0336200 I 0.000
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I 0.000
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I 0.000
POPTR_0013s09350 Populus trichocarpa POPTR_0013s09350 I 0.000
POPTR_0013s15280 Populus trichocarpa POPTR_0013s15280 I 0.000
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I 0.000
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I 0.000
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I 0.000
Si030224m.g Setaria italica Si030224m.g I 0.000
Si036380m.g Setaria italica Si036380m.g I 0.000
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I 0.000
TCM_042286 Theobroma cacao TCM_042286 I 0.000
ORGLA07G0207300 Oryza glaberrima ORGLA07G0207300 I 0.000
OPUNC07G24840 Oryza punctata OPUNC07G24840 I 0.000
MTR_5g075390 Medicago truncatula MTR_5g075390 I 0.000
OB03G26210 Oryza brachyantha OB03G26210 I 0.000
OB07G31840 Oryza brachyantha OB07G31840 I 0.000
OBART03G16510 Oryza barthii OBART03G16510 I 0.000
OBART07G26390 Oryza barthii OBART07G26390 I 0.000
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I 0.000
OLONG_008214 Oryza longistaminata OLONG_008214 I 0.000
OLONG_019327 Oryza longistaminata OLONG_019327 I 0.000
OMERI03G14760 Oryza meridionalis OMERI03G14760 I 0.000
OMERI07G23010 Oryza meridionalis OMERI07G23010 I 0.000
ONIVA03G17500 Oryza nivara ONIVA03G17500 I 0.000
ONIVA07G26100 Oryza nivara ONIVA07G26100 I 0.000
OPUNC03G15960 Oryza punctata OPUNC03G15960 I 0.000
TCM_045524 Theobroma cacao TCM_045524 I 0.000