SELMODRAFT_73144 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_73144 T005203_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR

YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.728 0.870
OS05G0497200
M01636_2.00
Oryza sativa
CGSCGCCR

YGGCGSCG
PBM
Weirauch et al.(2014)
pTH8640
0.721 0.804
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR

YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.684 0.804
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.684 0.804
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR

YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.684 0.804
ERF105
M01632_2.00
Arabidopsis thaliana
CGCCGGCM

KGCCGGCG
PBM
Weirauch et al.(2014)
pTH7233
0.682 0.739
ERF105
M06676_2.00
Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR

YGGCGGCGVHDNNDNNNNNNNNDN
Dap-seq
OMalley et al.(2016)
ERF105_colamp_a
0.682 0.739
ERF105
M06677_2.00
Arabidopsis thaliana
HDSCGCCGCCRYHDH

DHDRYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF105_col
0.682 0.739
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ23214 AP2 2 52

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29983.m003147 Ricinus communis 29983.m003147 I 0.679
30190.m011323 Ricinus communis 30190.m011323 I 0.728
AC198979.4_FG009 Zea mays AC198979.4_FG009 I 0.681
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.731
AMTR_s00009p00147970 Amborella trichopoda AMTR_s00009p00147970 I 0.677
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.683
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.727
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.733
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.680
BGIOSGA017797 Oryza indica BGIOSGA017797 I 0.721
Bo3g143340 Brassica oleracea Bo3g143340 I 0.713
Bo5g004090 Brassica oleracea Bo5g004090 I 0.709
Bo5g055840 Brassica oleracea Bo5g055840 I 0.713
Bo6g029320 Brassica oleracea Bo6g029320 I 0.702
Bo7g048190 Brassica oleracea Bo7g048190 I 0.713
Bostr.0124s0109 Boechera stricta Bostr.0124s0109 I 0.686
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.713
Bostr.15774s0261 Boechera stricta Bostr.15774s0261 I 0.682
Bra010881 Brassica rapa Bra010881 I 0.713
Bra030094 Brassica rapa Bra030094 I 0.713
Bra032898 Brassica rapa Bra032898 I 0.713
Bra038107 Brassica rapa Bra038107 I 0.702
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.680
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I 0.716
Cagra.0381s0006 Capsella grandiflora Cagra.0381s0006 I 0.686
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.688
Cagra.1472s0014 Capsella grandiflora Cagra.1472s0014 I 0.677
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.713
Cagra.3782s0036 Capsella grandiflora Cagra.3782s0036 I 0.682
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.688
Carubv10010374m.g Capsella rubella Carubv10010374m.g I 0.677
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.713
Carubv10027063m.g Capsella rubella Carubv10027063m.g I 0.682
Carubv10027246m.g Capsella rubella Carubv10027246m.g I 0.686
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.728
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.728
cassava46560.m1 Manihot esculenta cassava46560.m1 I 0.679
Ca_00326 Cicer arietinum Ca_00326 I 0.728
Ca_12080 Cicer arietinum Ca_12080 I 0.700
Ca_12205 Cicer arietinum Ca_12205 I 0.736
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.732
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.679
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.678
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.728
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.728
Ciclev10023393m.g Citrus clementina Ciclev10023393m.g I 0.686
Cla003319 Citrullus lanatus Cla003319 I 0.706
Cla005423 Citrullus lanatus Cla005423 I 0.682
Cla013723 Citrullus lanatus Cla013723 I 0.702
Cla020002 Citrullus lanatus Cla020002 I 0.728
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.680
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.728
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.694
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.706
ERF105 Arabidopsis thaliana AT5G51190 D 0.682
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.728
ERF12 Arabidopsis thaliana AT1G28360 I 0.713
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.713
ERF3 Arabidopsis thaliana AT1G50640 D 0.684
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.733
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.680
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.680
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.682
Eucgr.K00126 Eucalyptus grandis Eucgr.K00126 I 0.681
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.677
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.728
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.733
e_gw1.265.11.1 Physcomitrella patens e_gw1.265.11.1 I 0.680
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.750
fgenesh2_kg.8__1005__AT5G51190.1 Arabidopsis lyrata fgenesh2_kg.8__1005__AT5G51190.1 I 0.682
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.677
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.690
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.682
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.683
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.709
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.729
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.679
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.731
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.712
GLYMA10G04190 Glycine max GLYMA10G04190 I 0.681
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.702
GLYMA13G18400 Glycine max GLYMA13G18400 I 0.681
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.728
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.728
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.712
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.702
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.682
Gorai.009G165500 Gossypium raimondii Gorai.009G165500 I 0.703
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.698
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.728
GRMZM2G020054 Zea mays GRMZM2G020054 I 0.682
GRMZM2G066158 Zea mays GRMZM2G066158 I 0.679
GRMZM2G089995 Zea mays GRMZM2G089995 I 0.685
GRMZM2G132223 Zea mays GRMZM2G132223 I 0.686
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.680
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.743
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.743
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.744
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.738
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.723
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.715
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.687
gw1.13.222.1 Physcomitrella patens gw1.13.222.1 I 0.685
gw1.130.147.1 Physcomitrella patens gw1.130.147.1 I 0.677
gw1.2.361.1 Physcomitrella patens gw1.2.361.1 I 0.684
gw1.25.154.1 Physcomitrella patens gw1.25.154.1 I 0.696
gw1.37.164.1 Physcomitrella patens gw1.37.164.1 I 0.708
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.709
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.680
LPERR05G17470 Leersia perrieri LPERR05G17470 I 0.721
Lus10039857.g Linum usitatissimum Lus10039857.g I 0.687
MDP0000236605 Malus domestica MDP0000236605 I 0.752
MDP0000310904 Malus domestica MDP0000310904 I 0.752
MDP0000457509 Malus domestica MDP0000457509 I 0.753
MDP0000830129 Malus domestica MDP0000830129 I 0.678
MDP0000839828 Malus domestica MDP0000839828 I 0.677
mgf007166m Mimulus guttatus mgf007166m I 0.678
mgf016282m Mimulus guttatus mgf016282m I 0.677
mgf023367m Mimulus guttatus mgf023367m I 0.728
MLOC_66843 Hordeum vulgare MLOC_66843 I 0.714
MTR_1g069960 Medicago truncatula MTR_1g069960 I 0.678
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.710
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.728
MTR_2g015050 Medicago truncatula MTR_2g015050 I 0.696
MTR_3g053690 Medicago truncatula MTR_3g053690 I 0.687
MTR_5g085070 Medicago truncatula MTR_5g085070 I 0.725
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.686
OBART03G03890 Oryza barthii OBART03G03890 I 0.680
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.680
OGLUM05G22780 Oryza glumaepatula OGLUM05G22780 I 0.721
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.680
OMERI05G19480 Oryza meridionalis OMERI05G19480 I 0.721
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.680
ONIVA05G22260 Oryza nivara ONIVA05G22260 I 0.721
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.678
OPUNC05G19220 Oryza punctata OPUNC05G19220 I 0.721
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.728
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.680
ORGLA05G0187500 Oryza glaberrima ORGLA05G0187500 I 0.721
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.680
ORUFI05G22840 Oryza rufipogon ORUFI05G22840 I 0.721
OS03G0150200 Oryza sativa OS03G0150200 I 0.680
OS05G0497200 Oryza sativa OS05G0497200 D 0.721
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I 0.703
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.692
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I 0.681
Pavir.J22854 Panicum virgatum Pavir.J22854 I 0.681
PGSC0003DMG400013257 Solanum tuberosum PGSC0003DMG400013257 I 0.680
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.728
PK02998.1 Cannabis sativa PK02998.1 I 0.739
PK17878.1 Cannabis sativa PK17878.1 D 0.728
Pm010083 Prunus mume Pm010083 I 0.728
Pm014953 Prunus mume Pm014953 I 0.677
Pm017696 Prunus mume Pm017696 I 0.689
Pm020210 Prunus mume Pm020210 I 0.734
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.735
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.728
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.723
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.728
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.677
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.728
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.689
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.734
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.683
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.728
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.728
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.677
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.677
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.678
Sb01g046920 Sorghum bicolor Sb01g046920 I 0.681
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.694
Sb07g006190 Sorghum bicolor Sb07g006190 I 0.682
Sb07g006195 Sorghum bicolor Sb07g006195 I 0.682
Sb07g006200 Sorghum bicolor Sb07g006200 I 0.682
Sb07g006210 Sorghum bicolor Sb07g006210 I 0.682
SELMODRAFT_19889 Selaginella moellendorffii SELMODRAFT_19889 I 0.685
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.724
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.724
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.734
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I 0.710
SELMODRAFT_68470 Selaginella moellendorffii SELMODRAFT_68470 I 0.712
SELMODRAFT_72880 Selaginella moellendorffii SELMODRAFT_72880 I 0.818
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.734
SELMODRAFT_86738 Selaginella moellendorffii SELMODRAFT_86738 I 0.712
Si003053m.g Setaria italica Si003053m.g I 0.716
Si014469m.g Setaria italica Si014469m.g I 0.685
Si014474m.g Setaria italica Si014474m.g I 0.695
Si039759m.g Setaria italica Si039759m.g I 0.681
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.728
Solyc03g006320.1 Solanum lycopersicum Solyc03g006320.1 I 0.684
TCM_005706 Theobroma cacao TCM_005706 I 0.681
TCM_005707 Theobroma cacao TCM_005707 I 0.683
TCM_029823 Theobroma cacao TCM_029823 I 0.728
TCM_030804 Theobroma cacao TCM_030804 I 0.699
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.713
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.684
Thhalv10014591m.g Eutrema salsugineum Thhalv10014591m.g I 0.682
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I 0.679
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I 0.716
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.739
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.677
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.739
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.692