CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si004029m.g
(
Setaria italica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Si004029m.g
T005240_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.687
0.667
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si004029m
AP2
74
115
EYIGVQRRPWGRWAAEIRDPHYAVRKWLGTFDTAKDATRTYN
Links
Other
AP2
family TFs
Other
Setaria italica
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si018144m.g
Setaria italica
Si018144m.g
I
0.709
OPUNC02G31100
Oryza punctata
OPUNC02G31100
I
0.706
OMERI02G32080
Oryza meridionalis
OMERI02G32080
I
0.706
Pavir.J03216
Panicum virgatum
Pavir.J03216
I
0.701
Pavir.J32690
Panicum virgatum
Pavir.J32690
I
0.701
GRMZM2G173771
Zea mays
GRMZM2G173771
I
0.696
BGIOSGA005557
Oryza indica
BGIOSGA005557
I
0.693
ONIVA02G33420
Oryza nivara
ONIVA02G33420
I
0.693
OGLUM02G34120
Oryza glumaepatula
OGLUM02G34120
I
0.693
ORGLA02G0291300
Oryza glaberrima
ORGLA02G0291300
I
0.693
OBART02G33690
Oryza barthii
OBART02G33690
I
0.693
GRMZM2G103085
Zea mays
GRMZM2G103085
I
0.691
Bo6g091540
Brassica oleracea
Bo6g091540
I
0.690
Bra003883
Brassica rapa
Bra003883
I
0.690
Bo6g115850
Brassica oleracea
Bo6g115850
I
0.690
Bra016063
Brassica rapa
Bra016063
I
0.690
Bostr.26675s0318
Boechera stricta
Bostr.26675s0318
I
0.687
Cagra.1671s0052
Capsella grandiflora
Cagra.1671s0052
I
0.687
Thhalv10009418m.g
Eutrema salsugineum
Thhalv10009418m.g
I
0.687
Carubv10011057m.g
Capsella rubella
Carubv10011057m.g
I
0.687
ATERF14
Arabidopsis lyrata
scaffold_100393.1
I
0.687
ERF14
Arabidopsis thaliana
AT1G04370
D
0.687
Bra015310
Brassica rapa
Bra015310
I
0.687
Bo5g004520
Brassica oleracea
Bo5g004520
I
0.687
Gorai.008G155600
Gossypium raimondii
Gorai.008G155600
I
0.686
MDP0000517262
Malus domestica
MDP0000517262
I
0.686
orange1.1g046280m.g
Citrus sinensis
orange1.1g046280m.g
I
0.686
PRUPE_ppa022802mg
Prunus persica
PRUPE_ppa022802mg
I
0.686
Ciclev10006460m.g
Citrus clementina
Ciclev10006460m.g
I
0.686
Cucsa.095860
Cucumis sativus
Cucsa.095860
I
0.686
Pm019544
Prunus mume
Pm019544
I
0.686
Cucsa.300100
Cucumis sativus
Cucsa.300100
I
0.685
LPERR02G27530
Leersia perrieri
LPERR02G27530
I
0.685
SELMODRAFT_73174
Selaginella moellendorffii
SELMODRAFT_73174
I
0.684
SELMODRAFT_73177
Selaginella moellendorffii
SELMODRAFT_73177
I
0.684
SapurV1A.0007s0970
Salix purpurea
SapurV1A.0007s0970
I
0.683
OS02G0764700
Oryza sativa
OS02G0764700
I
0.683
Gorai.001G252400
Gossypium raimondii
Gorai.001G252400
I
0.682
gene21167-v1.0-hybrid
Fragaria vesca
gene21167-v1.0-hybrid
I
0.682
Lus10035076.g
Linum usitatissimum
Lus10035076.g
I
0.679
cassava4507.m1
Manihot esculenta
cassava4507.m1
I
0.679
fgenesh2_kg.3__2537__AT3G23220.1
Arabidopsis lyrata
fgenesh2_kg.3__2537__AT3G23220.1
I
0.677