Si015027m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si015027m.g T005281_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.691 0.800
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.691 0.800
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.689 0.780
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.689 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si015027m AP2 23 74

Links

Other AP2 family TFs
Other Setaria italica TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.809
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.809
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.809
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.809
OS08G0454000 Oryza sativa OS08G0454000 I 0.809
OB08G24280 Oryza brachyantha OB08G24280 I 0.809
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.809
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.809
OBART08G16950 Oryza barthii OBART08G16950 I 0.809
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.809
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.809
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.809
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.800
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.799
F775_23111 Aegilops tauschii F775_23111 I 0.797
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.764
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.752
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.750
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.742
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.740
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.740
Si008104m.g Setaria italica Si008104m.g I 0.739
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.736
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.736
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.709
Cla011318 Citrullus lanatus Cla011318 I 0.709
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.709
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.707
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.706
Si019636m.g Setaria italica Si019636m.g I 0.705
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.705
Bo8g068370 Brassica oleracea Bo8g068370 I 0.705
Bra016518 Brassica rapa Bra016518 I 0.705
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.702
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.700
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.699
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.699
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.699
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.699
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.699
Pm027117 Prunus mume Pm027117 I 0.699
29739.m003716 Ricinus communis 29739.m003716 I 0.699
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.699
TCM_037415 Theobroma cacao TCM_037415 I 0.699
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.699
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.698
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.698
OBART06G06190 Oryza barthii OBART06G06190 I 0.698
TCM_037486 Theobroma cacao TCM_037486 I 0.698
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.698
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.698
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.698
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.697
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.696
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.696
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.695
Bo8g102870 Brassica oleracea Bo8g102870 I 0.694
Bra031069 Brassica rapa Bra031069 I 0.694
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.693
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.693
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.693
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.693
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.693
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.691
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.691
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.691
ERF017 Arabidopsis thaliana AT1G19210 D 0.691
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.691
ERF018 Arabidopsis thaliana AT1G74930 D 0.689
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.689
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.689
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.689
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.689
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.688
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.688
MDP0000649022 Malus domestica MDP0000649022 I 0.688
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.688
Ca_01683 Cicer arietinum Ca_01683 I 0.688
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.688
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.688
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.687
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.687
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.686
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.686
mgf024162m Mimulus guttatus mgf024162m I 0.686
Bo6g119120 Brassica oleracea Bo6g119120 I 0.686
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.685
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.685
OS02G0781300 Oryza sativa OS02G0781300 I 0.685
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.685
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.685
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.685
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.685
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.685
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.685
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.684
OGLUM06G06550 Oryza glumaepatula OGLUM06G06550 N 0.684
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.684
29739.m003647 Ricinus communis 29739.m003647 I 0.683
mgf021940m Mimulus guttatus mgf021940m I 0.682
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.682
Bo6g086740 Brassica oleracea Bo6g086740 I 0.682
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.682
Bra003780 Brassica rapa Bra003780 I 0.682
OBART06G06230 Oryza barthii OBART06G06230 N 0.681
ORGLA06G0057400 Oryza glaberrima ORGLA06G0057400 N 0.681
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.680
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.680
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.680
Bra015882 Brassica rapa Bra015882 I 0.680
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.679
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.678
Cla007584 Citrullus lanatus Cla007584 I 0.678
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.677
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.677
Ca_09124 Cicer arietinum Ca_09124 I 0.677
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.677