Si018222m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si018222m.g T005300_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.734 0.860
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.703 0.840
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.703 0.840
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.697 0.840
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.697 0.840
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.678 0.820
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.678 0.820
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.678 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si018222m AP2 46 97

Links

Other AP2 family TFs
Other Setaria italica TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA02G10590 Oryza nivara ONIVA02G10590 I 0.774
BRADI3G08790 Brachypodium distachyon BRADI3G08790 I 0.774
OMERI02G10950 Oryza meridionalis OMERI02G10950 I 0.774
OGLUM02G09810 Oryza glumaepatula OGLUM02G09810 I 0.774
GRMZM2G047918 Zea mays GRMZM2G047918 I 0.774
LPERR06G15020 Leersia perrieri LPERR06G15020 I 0.774
OPUNC02G08670 Oryza punctata OPUNC02G08670 I 0.774
Pavir.Ab00844 Panicum virgatum Pavir.Ab00844 I 0.774
Si018188m.g Setaria italica Si018188m.g I 0.774
ORUFI02G09750 Oryza rufipogon ORUFI02G09750 I 0.774
ORGLA02G0087100 Oryza glaberrima ORGLA02G0087100 I 0.774
GRMZM2G005301 Zea mays GRMZM2G005301 I 0.771
F775_14820 Aegilops tauschii F775_14820 I 0.765
Traes_7DL_538583735 Triticum aestivum Traes_7DL_538583735 I 0.765
BRADI1G38110 Brachypodium distachyon BRADI1G38110 I 0.765
Si007144m.g Setaria italica Si007144m.g I 0.765
OMERI06G18780 Oryza meridionalis OMERI06G18780 I 0.765
ORUFI06G19350 Oryza rufipogon ORUFI06G19350 I 0.765
ONIVA06G21640 Oryza nivara ONIVA06G21640 I 0.765
MLOC_17203 Hordeum vulgare MLOC_17203 I 0.758
Pavir.Da00839 Panicum virgatum Pavir.Da00839 I 0.758
GRMZM2G073047 Zea mays GRMZM2G073047 I 0.756
BRADI3G33355 Brachypodium distachyon BRADI3G33355 I 0.746
OB06G25840 Oryza brachyantha OB06G25840 I 0.745
GLYMA01G13410 Glycine max GLYMA01G13410 I 0.745
GRMZM5G806839 Zea mays GRMZM5G806839 I 0.742
Si039427m.g Setaria italica Si039427m.g I 0.734
Q8LKX0_MAIZE Zea mays Q8LKX0_MAIZE D 0.734
Pavir.Ia02208 Panicum virgatum Pavir.Ia02208 I 0.734
Sb01g029065 Sorghum bicolor Sb01g029065 I 0.734
GRMZM5G889719 Zea mays GRMZM5G889719 I 0.734
MTR_7g046260 Medicago truncatula MTR_7g046260 I 0.732
GSMUA_Achr10G14070_001 Musa acuminata GSMUA_Achr10G14070_001 I 0.730
LPERR10G14320 Leersia perrieri LPERR10G14320 I 0.728
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I 0.725
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I 0.725
F775_11989 Aegilops tauschii F775_11989 I 0.725
TRAES3BF073700060CFD_g Triticum aestivum TRAES3BF073700060CFD_g I 0.723
Cla023465 Citrullus lanatus Cla023465 I 0.722
AC187157.4_FG001 Zea mays AC187157.4_FG001 I 0.719
BRADI2G06180 Brachypodium distachyon BRADI2G06180 I 0.719
OBART02G09680 Oryza barthii OBART02G09680 I 0.718
ORGLA10G0136200 Oryza glaberrima ORGLA10G0136200 I 0.718
OMERI08G00520 Oryza meridionalis OMERI08G00520 I 0.718
OPUNC10G16830 Oryza punctata OPUNC10G16830 I 0.718
ONIVA10G21000 Oryza nivara ONIVA10G21000 I 0.718
OGLUM10G18570 Oryza glumaepatula OGLUM10G18570 I 0.718
GSMUA_Achr9G05860_001 Musa acuminata GSMUA_Achr9G05860_001 I 0.717
Cucsa.312570 Cucumis sativus Cucsa.312570 I 0.716
BGIOSGA002184 Oryza indica BGIOSGA002184 I 0.714
ONIVA01G08000 Oryza nivara ONIVA01G08000 I 0.714
Cla017050 Citrullus lanatus Cla017050 I 0.711
Cucsa.116550 Cucumis sativus Cucsa.116550 I 0.711
OPUNC06G16400 Oryza punctata OPUNC06G16400 I 0.709
Si002749m.g Setaria italica Si002749m.g I 0.708
Pavir.Eb00249 Panicum virgatum Pavir.Eb00249 I 0.708
Sb03g002630 Sorghum bicolor Sb03g002630 I 0.708
GRMZM2G048621 Zea mays GRMZM2G048621 I 0.707
GRMZM5G816314 Zea mays GRMZM5G816314 I 0.707
Pavir.Ab02603 Panicum virgatum Pavir.Ab02603 I 0.707
GRMZM2G041839 Zea mays GRMZM2G041839 I 0.707
Pavir.Aa00833 Panicum virgatum Pavir.Aa00833 I 0.707
Cucsa.121080 Cucumis sativus Cucsa.121080 I 0.707
Sb04g032940 Sorghum bicolor Sb04g032940 I 0.707
GRMZM2G072926 Zea mays GRMZM2G072926 I 0.707
Si017865m.g Setaria italica Si017865m.g I 0.707
Si019772m.g Setaria italica Si019772m.g I 0.707
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.705
OBART01G06440 Oryza barthii OBART01G06440 I 0.704
OS01G0200600 Oryza sativa OS01G0200600 I 0.704
ORUFI01G06970 Oryza rufipogon ORUFI01G06970 I 0.704
ORGLA01G0061000 Oryza glaberrima ORGLA01G0061000 I 0.704
OMERI01G06530 Oryza meridionalis OMERI01G06530 I 0.704
OGLUM01G07430 Oryza glumaepatula OGLUM01G07430 I 0.704
OPUNC01G06210 Oryza punctata OPUNC01G06210 I 0.704
ERF035 Arabidopsis thaliana AT3G60490 D 0.703
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.703
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.703
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.703
GSMUA_Achr2G09430_001 Musa acuminata GSMUA_Achr2G09430_001 I 0.702
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.701
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.701
Cucsa.235510 Cucumis sativus Cucsa.235510 I 0.699
Cla004187 Citrullus lanatus Cla004187 I 0.699
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.698
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.698
mgf022802m Mimulus guttatus mgf022802m I 0.698
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.697
Pm017610 Prunus mume Pm017610 I 0.697
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.697
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.697
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.697
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.697
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.697
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.697
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.697
ERF034 Arabidopsis thaliana AT2G44940 D 0.697
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.697
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.696
30174.m008790 Ricinus communis 30174.m008790 I 0.696
TCM_005639 Theobroma cacao TCM_005639 I 0.696
TCM_044478 Theobroma cacao TCM_044478 I 0.694
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I 0.694
Bo3g037480 Brassica oleracea Bo3g037480 I 0.694
Bra000366 Brassica rapa Bra000366 I 0.694
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I 0.694
chr4.CM0617.510.nd Lotus japonicus chr4.CM0617.510.nd I 0.693
MTR_8g102800 Medicago truncatula MTR_8g102800 I 0.692
gene11882-v1.0-hybrid Fragaria vesca gene11882-v1.0-hybrid I 0.692
GLYMA08G03910 Glycine max GLYMA08G03910 I 0.692
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.692
Ca_05941 Cicer arietinum Ca_05941 I 0.692
Pavir.Ga01094 Panicum virgatum Pavir.Ga01094 I 0.691
Bra040333 Brassica rapa Bra040333 I 0.691
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I 0.691
Bra004878 Brassica rapa Bra004878 I 0.691
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.691
GSMUA_AchrUn_randomG24010_001 Musa acuminata GSMUA_AchrUn_randomG24010_001 I 0.691
Bo4g024220 Brassica oleracea Bo4g024220 I 0.691
Bo4g195280 Brassica oleracea Bo4g195280 I 0.691
mgf019024m Mimulus guttatus mgf019024m I 0.689
GLYMA05G35741 Glycine max GLYMA05G35741 I 0.689
GRMZM2G028969 Zea mays GRMZM2G028969 I 0.688
TCM_014892 Theobroma cacao TCM_014892 I 0.688
Gorai.010G075300 Gossypium raimondii Gorai.010G075300 I 0.687
Gorai.001G008100 Gossypium raimondii Gorai.001G008100 I 0.687
Eucgr.C03785 Eucalyptus grandis Eucgr.C03785 I 0.687
GRMZM5G842961 Zea mays GRMZM5G842961 I 0.686
Sb04g032960 Sorghum bicolor Sb04g032960 I 0.686
Si017995m.g Setaria italica Si017995m.g I 0.686
Bo3g171090 Brassica oleracea Bo3g171090 I 0.684
Bo7g115860 Brassica oleracea Bo7g115860 I 0.684
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.684
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.684
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.684
Bra037041 Brassica rapa Bra037041 I 0.684
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.684
mgf022971m Mimulus guttatus mgf022971m I 0.684
Bra034535 Brassica rapa Bra034535 I 0.684
TCM_028851 Theobroma cacao TCM_028851 I 0.684
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.684
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.683
PGSC0003DMG400000365 Solanum tuberosum PGSC0003DMG400000365 I 0.682
Solyc12g008350.1 Solanum lycopersicum Solyc12g008350.1 I 0.682
PK25970.1 Cannabis sativa PK25970.1 I 0.681
28353.m000054 Ricinus communis 28353.m000054 I 0.681
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I 0.681
Bo3g028500 Brassica oleracea Bo3g028500 I 0.681
Bra023026 Brassica rapa Bra023026 I 0.681
ERF043 Arabidopsis thaliana AT4G32800 D 0.678
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.678
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.678
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.678
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.678
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I 0.678
30146.m003535 Ricinus communis 30146.m003535 I 0.677
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.677