Si040039m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si040039m.g T005392_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.686 0.712
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si040039m AP2 16 68

Links

Other AP2 family TFs
Other Setaria italica TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si011941m.g Setaria italica Si011941m.g I 0.811
Sb07g023803 Sorghum bicolor Sb07g023803 I 0.800
OGLUM08G25360 Oryza glumaepatula OGLUM08G25360 I 0.800
OBART08G23880 Oryza barthii OBART08G23880 I 0.800
OLONG_010226 Oryza longistaminata OLONG_010226 I 0.800
OB08G30700 Oryza brachyantha OB08G30700 I 0.800
OMERI08G18690 Oryza meridionalis OMERI08G18690 I 0.800
ORGLA08G0192600 Oryza glaberrima ORGLA08G0192600 I 0.800
ORUFI08G26360 Oryza rufipogon ORUFI08G26360 I 0.800
OPUNC08G21790 Oryza punctata OPUNC08G21790 I 0.800
ONIVA09G01310 Oryza nivara ONIVA09G01310 I 0.800
Si015487m.g Setaria italica Si015487m.g I 0.800
LPERR08G20550 Leersia perrieri LPERR08G20550 I 0.800
Pavir.Fb02184 Panicum virgatum Pavir.Fb02184 I 0.800
Pavir.Fa00010 Panicum virgatum Pavir.Fa00010 I 0.800
F775_33015 Aegilops tauschii F775_33015 I 0.800
BGIOSGA029206 Oryza indica BGIOSGA029206 I 0.800
BGIOSGA029205 Oryza indica BGIOSGA029205 I 0.800
BRADI3G12565 Brachypodium distachyon BRADI3G12565 I 0.793
GRMZM2G060206 Zea mays GRMZM2G060206 I 0.791
cassava41615.m1 Manihot esculenta cassava41615.m1 I 0.713
Aquca_034_00377 Aquilegia coerulea Aquca_034_00377 N 0.713
Cla021852 Citrullus lanatus Cla021852 I 0.703
Cucsa.255320 Cucumis sativus Cucsa.255320 I 0.703
GRMZM2G060517 Zea mays GRMZM2G060517 I 0.701
Si032391m.g Setaria italica Si032391m.g I 0.701
Pavir.Bb01308 Panicum virgatum Pavir.Bb01308 I 0.701
ORGLA09G0166700 Oryza glaberrima ORGLA09G0166700 I 0.700
OS09G0571700 Oryza sativa OS09G0571700 I 0.700
ORUFI09G22030 Oryza rufipogon ORUFI09G22030 I 0.700
ONIVA01G39370 Oryza nivara ONIVA01G39370 I 0.700
OBART09G20380 Oryza barthii OBART09G20380 I 0.700
LPERR09G16370 Leersia perrieri LPERR09G16370 I 0.700
BGIOSGA029230 Oryza indica BGIOSGA029230 I 0.700
OGLUM09G21140 Oryza glumaepatula OGLUM09G21140 I 0.700
OPUNC09G18680 Oryza punctata OPUNC09G18680 I 0.700
OLONG_005596 Oryza longistaminata OLONG_005596 I 0.700
OB09G27120 Oryza brachyantha OB09G27120 I 0.699
29603.m000510 Ricinus communis 29603.m000510 I 0.699
GLYMA02G00890 Glycine max GLYMA02G00890 I 0.698
Solyc09g089910.1 Solanum lycopersicum Solyc09g089910.1 I 0.698
PGSC0003DMG400017233 Solanum tuberosum PGSC0003DMG400017233 I 0.698
TRIUR3_22798 Triticum urartu TRIUR3_22798 I 0.696
F775_23071 Aegilops tauschii F775_23071 I 0.696
Traes_4AS_FA4BBDBF9 Triticum aestivum Traes_4AS_FA4BBDBF9 I 0.696
Traes_4BS_180379032 Triticum aestivum Traes_4BS_180379032 I 0.696
Traes_4DS_AB2BEFAB3 Triticum aestivum Traes_4DS_AB2BEFAB3 I 0.696
Cla015064 Citrullus lanatus Cla015064 I 0.694
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I 0.691
cassava38508.m1 Manihot esculenta cassava38508.m1 I 0.690
Gorai.006G249800 Gossypium raimondii Gorai.006G249800 I 0.689
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.688
Cagra.0244s0009 Capsella grandiflora Cagra.0244s0009 I 0.686
Bra027493 Brassica rapa Bra027493 I 0.686
Bo9g059180 Brassica oleracea Bo9g059180 I 0.686
Thhalv10003355m.g Eutrema salsugineum Thhalv10003355m.g I 0.686
Bostr.3148s0125 Boechera stricta Bostr.3148s0125 I 0.686
ERF096 Arabidopsis thaliana AT5G43410 D 0.686
scaffold_800707.1 Arabidopsis lyrata scaffold_800707.1 I 0.686
Ciclev10007133m.g Citrus clementina Ciclev10007133m.g I 0.684
orange1.1g047241m.g Citrus sinensis orange1.1g047241m.g I 0.684
Lus10011831.g Linum usitatissimum Lus10011831.g I 0.683
cassava631.valid.m1 Manihot esculenta cassava631.valid.m1 I 0.682
SapurV1A.0007s0960 Salix purpurea SapurV1A.0007s0960 I 0.682
GLYMA10G33080 Glycine max GLYMA10G33080 I 0.681
GLYMA20G34550 Glycine max GLYMA20G34550 I 0.681
Cucsa.383680 Cucumis sativus Cucsa.383680 I 0.680
LjSGA_028626.1 Lotus japonicus LjSGA_028626.1 I 0.680
29584.m000237 Ricinus communis 29584.m000237 I 0.679
Traes_6BS_4C945B9F1 Triticum aestivum Traes_6BS_4C945B9F1 I 0.678
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.677
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.677