Solyc02g064960.2 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc02g064960.2 T005412_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.861 0.980
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.833 0.919
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.830 0.929
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.823 0.869
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g064960.2.1 AP2 162 212
Solyc02g064960.2.1 AP2 254 305

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.864
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.864
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.862
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.861
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.861
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.861
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.861
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.861
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.861
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.861
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.861
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.861
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.861
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.861
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.861
Cla000716 Citrullus lanatus Cla000716 I 0.861
Ca_09295 Cicer arietinum Ca_09295 I 0.861
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.861
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.861
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.861
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.861
Si012635m.g Setaria italica Si012635m.g I 0.861
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.861
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.861
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.861
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.861
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.861
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.861
Bo1g004960 Brassica oleracea Bo1g004960 I 0.861
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.861
PK02403.1 Cannabis sativa PK02403.1 I 0.861
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.861
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.861
AP2 Arabidopsis thaliana AT4G36920 I 0.861
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.861
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.861
Bo7g118400 Brassica oleracea Bo7g118400 I 0.861
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.861
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.861
Bra011741 Brassica rapa Bra011741 I 0.861
Bra017809 Brassica rapa Bra017809 I 0.861
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.861
mgf009315m Mimulus guttatus mgf009315m I 0.860
29805.m001494 Ricinus communis 29805.m001494 I 0.860
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.860
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.860
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.859
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.858
TCM_000665 Theobroma cacao TCM_000665 I 0.858
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.856
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.854
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.853
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.853
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.853
28752.m000339 Ricinus communis 28752.m000339 I 0.853
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.853
MDP0000200319 Malus domestica MDP0000200319 I 0.853
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.853
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.853
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.853
Ca_02499 Cicer arietinum Ca_02499 I 0.853
OS05G0121600 Oryza sativa OS05G0121600 I 0.852
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.852
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.852
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.852
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.852
PK07183.1 Cannabis sativa PK07183.1 I 0.852
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.852
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.852
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.852
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.852
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.852
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.852
Pm002492 Prunus mume Pm002492 I 0.852
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.852
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.852
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.852
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.852
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.852
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.852
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.852
TCM_022077 Theobroma cacao TCM_022077 I 0.852
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.852
Si025305m.g Setaria italica Si025305m.g I 0.852
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.852
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.852
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.852
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.852
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.852
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.851
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.851
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.850
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.850
TCM_042000 Theobroma cacao TCM_042000 I 0.850
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.850
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.850
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.850
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.850
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.850
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.850
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.850
F775_32962 Aegilops tauschii F775_32962 I 0.850
29169.m000017 Ricinus communis 29169.m000017 I 0.850
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.850
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.849
mgf021945m Mimulus guttatus mgf021945m I 0.849
Pm000974 Prunus mume Pm000974 I 0.848
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.848
MDP0000181606 Malus domestica MDP0000181606 I 0.848
Cla018124 Citrullus lanatus Cla018124 I 0.847
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.847
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.847
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.847
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.846
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.845
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.845
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.845
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.845
MDP0000137561 Malus domestica MDP0000137561 I 0.845
Pm030172 Prunus mume Pm030172 I 0.845
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.845
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.843
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.842
OB06G29960 Oryza brachyantha OB06G29960 I 0.842
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.842
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.842
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.842
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.842
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.841
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.841
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.840
Ca_14618 Cicer arietinum Ca_14618 I 0.840
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.839
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.836
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.836
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.836
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.836
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.836
Ca_12010 Cicer arietinum Ca_12010 I 0.836
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.836
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.836
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.836
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.836
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.835
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.834
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.834
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.833
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.832
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.832
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.832
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.831
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.831
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.830
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.830
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.830
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.830
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.830
Bo4g070350 Brassica oleracea Bo4g070350 I 0.829
Bra011939 Brassica rapa Bra011939 I 0.829
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.828
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.828
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.828
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.828
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.828
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.828
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.828
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.828
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.828
OBART07G08110 Oryza barthii OBART07G08110 I 0.828
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.828
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.828
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.828
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.828
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.828
OB03G45870 Oryza brachyantha OB03G45870 I 0.828
OS07G0235800 Oryza sativa OS07G0235800 I 0.828
Si029636m.g Setaria italica Si029636m.g I 0.827
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.827
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.827
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.827
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.827
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.827
mgf005133m Mimulus guttatus mgf005133m I 0.826
mgf010466m Mimulus guttatus mgf010466m I 0.826
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.826
Si036068m.g Setaria italica Si036068m.g I 0.825
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.825
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.825
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.825
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.825
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.825
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.824
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.823
P93632_MAIZE Zea mays P93632_MAIZE D 0.823
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.823
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.823
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.823
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.822
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.821
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.820
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.820
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.820
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.818
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.817
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.814
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.813
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.812
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.812
TOE3 Arabidopsis thaliana AT5G67180 I 0.811
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.811
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.811
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.811
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.810
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.810
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.810
MDP0000163645 Malus domestica MDP0000163645 I 0.809
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.809
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.809
Bo7g064000 Brassica oleracea Bo7g064000 I 0.808
Bra012139 Brassica rapa Bra012139 I 0.808
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.806
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.805
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.805
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.804
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.796
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.794
OS03G0818800 Oryza sativa OS03G0818800 I 0.793
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.789
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.789
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.788
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.788
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.786
Cla020549 Citrullus lanatus Cla020549 I 0.783
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.774
Cla018549 Citrullus lanatus Cla018549 I 0.770
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.717
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.713
Si006371m.g Setaria italica Si006371m.g I 0.710
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
PK14490.1 Cannabis sativa PK14490.1 I 0.689
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.678