Solyc03g117130.2 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc03g117130.2 T005440_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.838 0.902
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.838 0.902
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.735 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g117130.2.1 AP2 6 57

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000945701 Angiostrongylus cantonensis ACAC_0000945701 N 0.000
ANCCAN_18878 Ancylostoma caninum ANCCAN_18878 I 0.000
ANCCEY_14798 Ancylostoma ceylanicum ANCCEY_14798 N 0.000
ANCDUO_21609 Ancylostoma duodenale ANCDUO_21609 I 0.000
ASIM_0001398401 Anisakis simplex ASIM_0001398401 N 0.000
Bm6553 Brugia malayi Bm6553 N 0.000
BXY_0367500 Bursaphelenchus xylophilus BXY_0367500 N 0.000
CBG05538 Caenorhabditis briggsae CBG05538 I 0.000
CBN19762 Caenorhabditis brenneri CBN19762 I 0.000
CGOC_0000345301 Cylicostephanus goldi CGOC_0000345301 I 0.000
CRE21236 Caenorhabditis remanei CRE21236 I 0.000
DICVIV_05295 Dictyocaulus viviparus DICVIV_05295 N 0.000
GPUH_0001120501 Gongylonema pulchrum GPUH_0001120501 N 0.000
HPBE_0001384101 Heligmosomoides bakeri HPBE_0001384101 N 0.000
L889_g9935 Steinernema feltiae L889_g9935 N 0.000
L892_g11291 Steinernema scapterisci L892_g11291 N 0.000
L893_g17711 Steinernema glaseri L893_g17711 N 0.000
L898_g18025 Steinernema monticolum L898_g18025 N 0.000
Minc08655 Meloidogyne incognita Minc08655 N 0.000
nAv.1.0.1.g02361 Acanthocheilonema viteae nAv.1.0.1.g02361 N 0.000
NBR_0001584001 Nippostrongylus brasiliensis NBR_0001584001 N 0.000
NECAME_08042 Necator americanus NECAME_08042 N 0.000
nLs.2.1.2.g08792 Litomosoides sigmodontis nLs.2.1.2.g08792 N 0.000
OESDEN_01522 Oesophagostomum dentatum OESDEN_01522 N 0.000
OFLC_0000276401 Onchocerca flexuosa OFLC_0000276401 N 0.000
PPA12559 Pristionchus pacificus PPA12559 N 0.000
PTRK_0001041600 Parastrongyloides trichosuri PTRK_0001041600 N 0.000
snap_masked-nMf.1.1.scaf42701-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf42701-processed-gene-0.2 N 0.000
SPAL_0000348500 Strongyloides papillosus SPAL_0000348500 N 0.000
SVE_0177100 Strongyloides venezuelensis SVE_0177100 N 0.000
TCLT_0000958101 Thelazia callipaeda TCLT_0000958101 N 0.000
WBGene00242919 Onchocerca volvulus WBGene00242919 N 0.000
WUBG_06876 Wuchereria bancrofti WUBG_06876 N 0.000
Y44A6D.3 Caenorhabditis elegans WBGene00012854 D 0.000