Solyc07g064890.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc07g064890.1 T005495_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR

YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.745 0.913
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.745 0.913
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR

YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.745 0.913
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN

NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.732 0.826
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD

HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.732 0.826
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH

DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.732 0.826
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR

YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.711 0.804
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD

HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.678 0.696
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD

HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.678 0.696
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN

NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.678 0.696
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc07g064890.1.1 AP2 38 88

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_20810 Aegilops tauschii F775_20810 I 0.680
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.735
AMTR_s00077p00176570 Amborella trichopoda AMTR_s00077p00176570 I 0.700
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.715
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.798
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.705
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.678
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I 0.680
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I 0.685
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.731
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.701
ERF7 Arabidopsis thaliana AT3G20310 D 0.732
ERF13 Arabidopsis thaliana AT2G44840 D 0.678
ERF3 Arabidopsis thaliana AT1G50640 D 0.745
ERF12 Arabidopsis thaliana AT1G28360 I 0.701
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.683
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I 0.692
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.701
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.695
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.731
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.749
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I 0.704
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.702
Bo3g066710 Brassica oleracea Bo3g066710 I 0.683
Bo4g024140 Brassica oleracea Bo4g024140 I 0.678
Bo6g022410 Brassica oleracea Bo6g022410 I 0.781
Bo5g055840 Brassica oleracea Bo5g055840 I 0.701
Bo5g109800 Brassica oleracea Bo5g109800 I 0.685
Bo4g195220 Brassica oleracea Bo4g195220 I 0.678
Bo1g102220 Brassica oleracea Bo1g102220 I 0.677
Bo1g108970 Brassica oleracea Bo1g108970 I 0.688
Bo3g074840 Brassica oleracea Bo3g074840 I 0.710
Bo3g143340 Brassica oleracea Bo3g143340 I 0.701
Bo7g048190 Brassica oleracea Bo7g048190 I 0.701
Bra001588 Brassica rapa Bra001588 I 0.683
Bra035792 Brassica rapa Bra035792 I 0.685
Bra037630 Brassica rapa Bra037630 I 0.678
Bra038261 Brassica rapa Bra038261 I 0.688
Bra039658 Brassica rapa Bra039658 I 0.681
Bra023748 Brassica rapa Bra023748 I 0.677
Bra018864 Brassica rapa Bra018864 I 0.740
Bra032898 Brassica rapa Bra032898 I 0.701
Bra010881 Brassica rapa Bra010881 I 0.701
Bra004873 Brassica rapa Bra004873 I 0.678
Bra001784 Brassica rapa Bra001784 I 0.710
Bra030094 Brassica rapa Bra030094 I 0.701
PK02998.1 Cannabis sativa PK02998.1 I 0.724
PK17878.1 Cannabis sativa PK17878.1 D 0.711
PK23186.1 Cannabis sativa PK23186.1 I 0.682
PK25211.1 Cannabis sativa PK25211.1 I 0.818
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.701
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.747
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I 0.701
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.678
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.747
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.701
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.678
Carubv10014475m.g Capsella rubella Carubv10014475m.g I 0.701
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.687
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.711
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.795
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.808
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.683
estExt_fgeneshCV_pg.C_120242 Chlorella vulgaris estExt_fgeneshCV_pg.C_120242 I 0.683
Ca_00326 Cicer arietinum Ca_00326 I 0.711
Ca_12205 Cicer arietinum Ca_12205 I 0.724
Ca_17824 Cicer arietinum Ca_17824 I 0.729
Ca_20544 Cicer arietinum Ca_20544 I 0.688
Ca_22534 Cicer arietinum Ca_22534 I 0.683
Cla020002 Citrullus lanatus Cla020002 I 0.711
Cla013723 Citrullus lanatus Cla013723 I 0.742
Cla005423 Citrullus lanatus Cla005423 I 0.779
Cla003319 Citrullus lanatus Cla003319 I 0.763
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.808
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.683
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.818
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.711
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.711
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.683
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.808
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.818
estExt_Genemark1.C_100079 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_100079 I 0.683
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.752
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.678
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.763
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.771
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.711
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.685
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.682
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.743
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.678
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.754
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.753
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.701
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.808
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.731
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.679
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.714
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.710
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.683
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.701
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.714
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.711
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.735
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.711
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.772
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.765
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.722
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.747
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.772
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.701
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.695
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.723
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.711
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.736
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.755
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.683
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.760
MLOC_66843 Hordeum vulgare MLOC_66843 I 0.703
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.750
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.682
Lus10017907.g Linum usitatissimum Lus10017907.g I 0.682
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.747
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.777
Lus10035076.g Linum usitatissimum Lus10035076.g I 0.691
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.777
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.785
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.689
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.711
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.734
MDP0000243113 Malus domestica MDP0000243113 I 0.782
MDP0000839828 Malus domestica MDP0000839828 I 0.808
MDP0000542633 Malus domestica MDP0000542633 I 0.803
MDP0000457509 Malus domestica MDP0000457509 I 0.703
MDP0000310904 Malus domestica MDP0000310904 I 0.693
MDP0000629527 Malus domestica MDP0000629527 I 0.803
MDP0000744693 Malus domestica MDP0000744693 I 0.782
MDP0000236605 Malus domestica MDP0000236605 I 0.693
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.787
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.707
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.711
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.683
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.751
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.711
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.711
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.677
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.677
mgf023367m Mimulus guttatus mgf023367m I 0.711
mgf016282m Mimulus guttatus mgf016282m I 0.808
mgf007166m Mimulus guttatus mgf007166m I 0.808
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.728
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.683
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.730
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.779
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.726
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.769
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.756
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.726
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I 0.769
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.726
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.708
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.753
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.742
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.742
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.742
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.750
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.742
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.694
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.720
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.749
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.749
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I 0.691
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.694
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.694
fgenesh1_pg.scaffold_6000034 Physcomitrella patens fgenesh1_pg.scaffold_6000034 I 0.685
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.720
e_gw1.5.258.1 Physcomitrella patens e_gw1.5.258.1 I 0.681
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.720
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.684
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.720
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.681
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.711
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.705
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.683
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.810
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.683
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.711
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.717
Pm010083 Prunus mume Pm010083 I 0.711
Pm020210 Prunus mume Pm020210 I 0.717
Pm011907 Prunus mume Pm011907 I 0.803
Pm014953 Prunus mume Pm014953 I 0.808
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.717
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.787
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.808
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.711
30190.m011323 Ricinus communis 30190.m011323 I 0.711
27904.m000217 Ricinus communis 27904.m000217 I 0.683
29640.m000403 Ricinus communis 29640.m000403 I 0.810
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.711
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.711
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.791
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.683
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.791
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.713
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.707
SELMODRAFT_19889 Selaginella moellendorffii SELMODRAFT_19889 I 0.684
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.713
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I 0.684
SELMODRAFT_402810 Selaginella moellendorffii SELMODRAFT_402810 I 0.679
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.703
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.707
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.703
SELMODRAFT_439762 Selaginella moellendorffii SELMODRAFT_439762 I 0.679
Si036615m.g Setaria italica Si036615m.g I 0.681
Si003053m.g Setaria italica Si003053m.g I 0.704
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.814
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.730
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.711
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.806
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.711
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.810
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.739
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.749
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.722
TCM_031608 Theobroma cacao TCM_031608 I 0.683
TCM_030804 Theobroma cacao TCM_030804 I 0.755
TCM_029823 Theobroma cacao TCM_029823 I 0.711
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I 0.704
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.774
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.724
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.724
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.808
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.711
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.749
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.749
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.699
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.700