CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc09g007260.2
(
Solanum lycopersicum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Solyc09g007260.2
T005511_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc09g007260.2.1
AP2
142
192
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
Solyc09g007260.2.1
AP2
234
287
SKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGKEAVTNFELSTYEGELST
Links
Other
AP2
family TFs
Other
Solanum lycopersicum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400027904
Solanum tuberosum
PGSC0003DMG400027904
I
0.820
GLYMA11G15650
Glycine max
GLYMA11G15650
I
0.796
Pavir.J11433
Panicum virgatum
Pavir.J11433
I
0.791
Pavir.J23348
Panicum virgatum
Pavir.J23348
I
0.791
ORUFI05G01620
Oryza rufipogon
ORUFI05G01620
N
0.786
OGLUM05G01570
Oryza glumaepatula
OGLUM05G01570
N
0.786
LPERR05G01420
Leersia perrieri
LPERR05G01420
I
0.786
OPUNC05G01480
Oryza punctata
OPUNC05G01480
I
0.786
OMERI05G01620
Oryza meridionalis
OMERI05G01620
N
0.786
ONIVA05G01600
Oryza nivara
ONIVA05G01600
N
0.786
OLONG_026757
Oryza longistaminata
OLONG_026757
I
0.786
orange1.1g010454m.g
Citrus sinensis
orange1.1g010454m.g
I
0.785
GLYMA13G40470
Glycine max
GLYMA13G40470
I
0.776
TCM_022077
Theobroma cacao
TCM_022077
I
0.774
PGSC0003DMG400025390
Solanum tuberosum
PGSC0003DMG400025390
I
0.774
BRADI2G37800
Brachypodium distachyon
BRADI2G37800
I
0.774
SapurV1A.0209s0320
Salix purpurea
SapurV1A.0209s0320
I
0.772
Aquca_027_00133
Aquilegia coerulea
Aquca_027_00133
I
0.769
SapurV1A.0247s0170
Salix purpurea
SapurV1A.0247s0170
I
0.769
GLYMA12G07800
Glycine max
GLYMA12G07800
I
0.764
Sb09g002080
Sorghum bicolor
Sb09g002080
N
0.749
GRMZM2G700665
Zea mays
GRMZM2G700665
I
0.745
TCM_042000
Theobroma cacao
TCM_042000
I
0.741
MTR_4g061200
Medicago truncatula
MTR_4g061200
I
0.735
Cla013460
Citrullus lanatus
Cla013460
N
0.726
Cucsa.051660
Cucumis sativus
Cucsa.051660
I
0.723
MTR_2g093060
Medicago truncatula
MTR_2g093060
I
0.722
TCM_043051
Theobroma cacao
TCM_043051
N
0.714
Bostr.27991s0069
Boechera stricta
Bostr.27991s0069
N
0.708
RAP2.7
Arabidopsis thaliana
AT2G28550
D
0.705
Thhalv10016626m.g
Eutrema salsugineum
Thhalv10016626m.g
I
0.705
RAP2.7
Arabidopsis lyrata
fgenesh2_kg.4__825__AT2G28550.1
N
0.705
Cagra.1809s0003
Capsella grandiflora
Cagra.1809s0003
I
0.705
Bo3g040110
Brassica oleracea
Bo3g040110
N
0.701
POPTR_0010s22320
Populus trichocarpa
POPTR_0010s22320
I
0.681