Solyc09g091950.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc09g091950.1 T005521_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.834 0.900
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.821 0.880
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.821 0.880
AT5G65130
M06686_2.00
Arabidopsis thaliana
YCDYCDCCRCCGCCN

NGGCGGYGGHGRHGR
Dap-seq
OMalley et al.(2016)
At5g65130_col_a
0.697 0.780
AT5G65130
M06687_2.00
Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW

WKGKCGGYGSHDNNDNNNN
Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a
0.697 0.780
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.687 0.680
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc09g091950.1.1 AP2 246 297

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

445 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_07800 Capronia coronata A1O1_07800 N 0.000
A1O3_10189 Capronia epimyces A1O3_10189 N 0.000
A1O5_07606 Cladophialophora psammophila A1O5_07606 N 0.000
A1O7_09976 Cladophialophora yegresii A1O7_09976 N 0.000
G647_08304 Cladophialophora carrionii G647_08304 N 0.000
HMPREF1120_08680 Exophiala dermatitidis HMPREF1120_08680 N 0.000
PV04_10583 Capronia semiimmersa PV04_10583 N 0.000
PV05_02814 Exophiala xenobiotica PV05_02814 N 0.000
PV05_09918 Exophiala xenobiotica PV05_09918 N 0.000
PV06_08424 Exophiala oligosperma PV06_08424 N 0.000
PV07_12267 Cladophialophora immunda PV07_12267 N 0.000
PV08_06735 Exophiala spinifera PV08_06735 N 0.000
PV10_00980 Exophiala mesophila PV10_00980 N 0.000
PV11_05115 Exophiala sideris PV11_05115 N 0.000
Z517_12257 Fonsecaea pedrosoi Z517_12257 N 0.000
Z518_06232 Rhinocladiella mackenziei Z518_06232 N 0.000
Z519_06169 Cladophialophora bantiana Z519_06169 N 0.000