Solyc10g006130.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc10g006130.1 T005522_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.741 0.891
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.741 0.891
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.741 0.891
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.728 0.804
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.728 0.804
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.728 0.804
PK17878.1
M01099_2.00 		Cannabis sativa
CGCCGYCR
YGRCGGCG		 PBM
Lambert et al.(2019)
pTH10133 		0.711 0.804
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.679 0.696
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.679 0.696
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.679 0.696
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g006130.1.1 AP2 27 77

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.814
PK25211.1 Cannabis sativa PK25211.1 I 0.814
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.814
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.814
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.810
29640.m000403 Ricinus communis 29640.m000403 I 0.806
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.806
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.806
Pm014953 Prunus mume Pm014953 I 0.804
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.804
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.804
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.804
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.804
MDP0000839828 Malus domestica MDP0000839828 I 0.804
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.804
mgf007166m Mimulus guttatus mgf007166m I 0.804
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.804
mgf016282m Mimulus guttatus mgf016282m I 0.804
MDP0000629527 Malus domestica MDP0000629527 I 0.799
MDP0000542633 Malus domestica MDP0000542633 I 0.799
Pm011907 Prunus mume Pm011907 I 0.799
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.794
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.791
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.787
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.787
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.783
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.783
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.781
MDP0000243113 Malus domestica MDP0000243113 I 0.778
MDP0000744693 Malus domestica MDP0000744693 I 0.778
Bo6g022410 Brassica oleracea Bo6g022410 I 0.777
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.776
Cla005423 Citrullus lanatus Cla005423 I 0.775
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.774
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.774
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.770
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.768
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.768
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.767
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I 0.765
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.765
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.761
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.759
Cla003319 Citrullus lanatus Cla003319 I 0.759
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.756
TCM_030804 Theobroma cacao TCM_030804 I 0.752
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.752
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.751
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.751
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.749
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.749
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.748
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.747
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.746
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.746
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.746
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.746
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.746
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.746
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.746
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.746
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.743
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.743
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.743
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.743
ERF3 Arabidopsis thaliana AT1G50640 D 0.741
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.739
Cla013723 Citrullus lanatus Cla013723 I 0.738
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.738
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.738
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.738
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.738
Bra018864 Brassica rapa Bra018864 I 0.736
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.735
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.732
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.732
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.731
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.730
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.730
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.728
ERF7 Arabidopsis thaliana AT3G20310 D 0.728
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.727
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.727
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.726
Ca_17824 Cicer arietinum Ca_17824 I 0.725
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.724
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.722
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.722
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.722
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.722
Ca_12205 Cicer arietinum Ca_12205 I 0.720
PK02998.1 Cannabis sativa PK02998.1 I 0.720
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.720
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.720
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.720
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.720
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.719
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.717
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.717
Pm020210 Prunus mume Pm020210 I 0.717
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.716
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.716
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.716
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.715
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.714
Cla020002 Citrullus lanatus Cla020002 I 0.711
Pm010083 Prunus mume Pm010083 I 0.711
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.711
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.711
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.711
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.711
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.711
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.711
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.711
30190.m011323 Ricinus communis 30190.m011323 I 0.711
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.711
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.711
PK17878.1 Cannabis sativa PK17878.1 D 0.711
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.711
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.711
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.711
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.711
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.711
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.711
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.711
TCM_029823 Theobroma cacao TCM_029823 I 0.711
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.711
mgf023367m Mimulus guttatus mgf023367m I 0.711
Ca_00326 Cicer arietinum Ca_00326 I 0.711
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.711
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.711
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.710
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.710
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.709
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.709
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.708
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.707
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.707
Bra001784 Brassica rapa Bra001784 I 0.706
Bo3g074840 Brassica oleracea Bo3g074840 I 0.706
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.705
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.705
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I 0.704
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I 0.704
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.704
Si003053m.g Setaria italica Si003053m.g I 0.704
MLOC_66843 Hordeum vulgare MLOC_66843 I 0.703
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.702
Bra030094 Brassica rapa Bra030094 I 0.701
Bra032898 Brassica rapa Bra032898 I 0.701
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.701
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.701
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.701
Bra010881 Brassica rapa Bra010881 I 0.701
Bo5g055840 Brassica oleracea Bo5g055840 I 0.701
ERF12 Arabidopsis thaliana AT1G28360 I 0.701
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.701
Bo3g143340 Brassica oleracea Bo3g143340 I 0.701
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.701
Bo7g048190 Brassica oleracea Bo7g048190 I 0.701
MDP0000457509 Malus domestica MDP0000457509 I 0.700
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.699
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.699
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I 0.698
Carubv10014475m.g Capsella rubella Carubv10014475m.g I 0.698
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.697
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.697
AMTR_s00077p00176570 Amborella trichopoda AMTR_s00077p00176570 I 0.696
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.696
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.695
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.691
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I 0.691
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.691
MDP0000310904 Malus domestica MDP0000310904 I 0.690
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.690
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.690
MDP0000236605 Malus domestica MDP0000236605 I 0.690
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.690
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.689
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I 0.688
Lus10035076.g Linum usitatissimum Lus10035076.g I 0.687
SELMODRAFT_19889 Selaginella moellendorffii SELMODRAFT_19889 I 0.686
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I 0.686
Ca_20544 Cicer arietinum Ca_20544 I 0.685
fgenesh1_pg.scaffold_6000034 Physcomitrella patens fgenesh1_pg.scaffold_6000034 I 0.685
Bo1g108970 Brassica oleracea Bo1g108970 I 0.684
Bra038261 Brassica rapa Bra038261 I 0.684
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.683
Lus10017907.g Linum usitatissimum Lus10017907.g I 0.682
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.682
PK23186.1 Cannabis sativa PK23186.1 I 0.682
e_gw1.5.258.1 Physcomitrella patens e_gw1.5.258.1 I 0.681
Bra035792 Brassica rapa Bra035792 I 0.681
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I 0.681
Bo5g109800 Brassica oleracea Bo5g109800 I 0.681
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.681
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.680
ERF13 Arabidopsis thaliana AT2G44840 D 0.679
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.679
estExt_fgeneshCV_pg.C_120242 Chlorella vulgaris estExt_fgeneshCV_pg.C_120242 I 0.679
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.679
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.679
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.679
Bo4g195220 Brassica oleracea Bo4g195220 I 0.679
Bo3g066710 Brassica oleracea Bo3g066710 I 0.679
Bo4g024140 Brassica oleracea Bo4g024140 I 0.679
Bra001588 Brassica rapa Bra001588 I 0.679
Bra004873 Brassica rapa Bra004873 I 0.679
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.679
Bra037630 Brassica rapa Bra037630 I 0.679
SELMODRAFT_402810 Selaginella moellendorffii SELMODRAFT_402810 I 0.679
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.679
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.679
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.679
27904.m000217 Ricinus communis 27904.m000217 I 0.679
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.679
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.679
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.679
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.679
estExt_Genemark1.C_100079 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_100079 I 0.679
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.679
Ca_22534 Cicer arietinum Ca_22534 I 0.679
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.679
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.679
SELMODRAFT_439762 Selaginella moellendorffii SELMODRAFT_439762 I 0.679
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.679
TCM_031608 Theobroma cacao TCM_031608 I 0.679
Si036615m.g Setaria italica Si036615m.g I 0.678
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.678
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.677
Bra039658 Brassica rapa Bra039658 I 0.677
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.677
F775_20810 Aegilops tauschii F775_20810 I 0.677