Solyc10g080310.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc10g080310.1 T005529_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.762 0.955
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.753 0.932
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g080310.1.1 AP2 28 73

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.772
27810.m000639 Ricinus communis 27810.m000639 I 0.772
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.772
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.772
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.772
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.772
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.772
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.772
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.772
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.772
Ca_07264 Cicer arietinum Ca_07264 I 0.772
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.772
OBART03G05550 Oryza barthii OBART03G05550 I 0.768
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.768
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.768
DREB2E Oryza sativa OS03G0174400 I 0.768
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.768
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.768
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.768
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.768
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.768
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.768
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.768
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.768
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.768
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.768
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.768
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.768
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.766
MDP0000871361 Malus domestica MDP0000871361 I 0.766
MDP0000703626 Malus domestica MDP0000703626 I 0.766
Pm025865 Prunus mume Pm025865 I 0.766
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.764
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.764
TCM_024756 Theobroma cacao TCM_024756 I 0.763
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.763
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.763
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.762
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.762
PK08602.1 Cannabis sativa PK08602.1 D 0.762
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.759
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.758
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.758
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.758
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.756
Bo6g073020 Brassica oleracea Bo6g073020 I 0.756
Cla017778 Citrullus lanatus Cla017778 I 0.756
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.756
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.756
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.755
DREB2F Arabidopsis thaliana AT3G57600 D 0.753
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.753
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.753
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.753
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.753
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.753
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.747
Bo8g092010 Brassica oleracea Bo8g092010 I 0.746
Bra007341 Brassica rapa Bra007341 I 0.746
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.746
Bo4g111040 Brassica oleracea Bo4g111040 I 0.738
Bra014617 Brassica rapa Bra014617 I 0.738
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.732
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.732
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.728
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.721
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.716
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.680
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.680