Solyc10g084340.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc10g084340.1 T005532_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.856 0.949
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.843 0.960
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.837 0.949
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.813 0.848
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g084340.1.1 AP2 134 184
Solyc10g084340.1.1 AP2 226 277

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.869
F775_32962 Aegilops tauschii F775_32962 I 0.869
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.869
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.869
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.869
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.869
TCM_042000 Theobroma cacao TCM_042000 I 0.869
mgf021945m Mimulus guttatus mgf021945m I 0.866
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.863
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.863
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.862
Ca_02499 Cicer arietinum Ca_02499 I 0.862
MDP0000200319 Malus domestica MDP0000200319 I 0.862
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.862
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.861
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.861
TCM_022077 Theobroma cacao TCM_022077 I 0.861
PK07183.1 Cannabis sativa PK07183.1 I 0.861
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.861
28752.m000339 Ricinus communis 28752.m000339 I 0.861
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.860
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.860
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.860
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.860
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.860
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.860
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.860
OS05G0121600 Oryza sativa OS05G0121600 I 0.860
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.860
Pm002492 Prunus mume Pm002492 I 0.860
29805.m001494 Ricinus communis 29805.m001494 I 0.860
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.860
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.860
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.860
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.860
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.860
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.860
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.860
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.860
Si025305m.g Setaria italica Si025305m.g I 0.860
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.860
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.860
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.860
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.859
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.859
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.859
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.859
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.859
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.858
Cla000716 Citrullus lanatus Cla000716 I 0.857
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.857
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.857
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.857
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.857
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.857
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.857
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.857
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.857
mgf009315m Mimulus guttatus mgf009315m I 0.857
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.857
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.857
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.857
PK02403.1 Cannabis sativa PK02403.1 I 0.857
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.857
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.857
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.857
AP2 Arabidopsis thaliana AT4G36920 I 0.856
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.856
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.856
Bo1g004960 Brassica oleracea Bo1g004960 I 0.856
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.856
Bo7g118400 Brassica oleracea Bo7g118400 I 0.856
Bra011741 Brassica rapa Bra011741 I 0.856
Bra017809 Brassica rapa Bra017809 I 0.856
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.856
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.856
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.856
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.856
Ca_09295 Cicer arietinum Ca_09295 I 0.856
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.856
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.855
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.855
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.855
MDP0000181606 Malus domestica MDP0000181606 I 0.855
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.855
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.855
Pm000974 Prunus mume Pm000974 I 0.855
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.854
TCM_000665 Theobroma cacao TCM_000665 I 0.854
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.854
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.853
Cla018124 Citrullus lanatus Cla018124 I 0.853
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.853
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.851
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.851
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.849
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.848
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.847
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.847
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.847
29169.m000017 Ricinus communis 29169.m000017 I 0.847
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.847
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.847
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.847
Si012635m.g Setaria italica Si012635m.g I 0.847
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.847
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.847
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.847
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.847
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.846
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.846
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.846
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.844
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.844
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.843
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.843
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.843
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.843
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.843
Ca_12010 Cicer arietinum Ca_12010 I 0.842
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.842
Pm030172 Prunus mume Pm030172 I 0.841
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.841
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.841
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.841
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.841
MDP0000137561 Malus domestica MDP0000137561 I 0.840
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.840
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.840
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.840
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.839
Ca_14618 Cicer arietinum Ca_14618 I 0.839
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.839
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.838
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.838
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.838
OS07G0235800 Oryza sativa OS07G0235800 I 0.838
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.838
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.838
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.838
OBART07G08110 Oryza barthii OBART07G08110 I 0.838
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.838
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.838
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.838
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.837
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.837
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.837
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.837
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.837
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.837
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.837
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.836
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.836
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.836
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.835
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.835
OB06G29960 Oryza brachyantha OB06G29960 I 0.835
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.835
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.835
Bo4g070350 Brassica oleracea Bo4g070350 I 0.835
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.835
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.835
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.835
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.835
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.835
Bra011939 Brassica rapa Bra011939 I 0.835
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.835
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.835
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.835
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.835
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.835
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.835
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.834
Si029636m.g Setaria italica Si029636m.g I 0.834
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.834
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.834
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.834
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.834
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.834
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.834
Si036068m.g Setaria italica Si036068m.g I 0.834
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.834
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.834
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.831
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.831
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.830
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.829
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.829
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.828
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.828
OB03G45870 Oryza brachyantha OB03G45870 I 0.827
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.824
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.823
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.823
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.823
mgf010466m Mimulus guttatus mgf010466m I 0.822
mgf005133m Mimulus guttatus mgf005133m I 0.822
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.821
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.819
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.819
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.818
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.818
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.818
MDP0000163645 Malus domestica MDP0000163645 I 0.817
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.817
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.816
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.813
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.813
P93632_MAIZE Zea mays P93632_MAIZE D 0.813
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.812
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.810
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.809
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.807
TOE3 Arabidopsis thaliana AT5G67180 I 0.807
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.807
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.806
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.806
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.805
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.804
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.804
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.804
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.802
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.802
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.802
Bra012139 Brassica rapa Bra012139 I 0.800
Bo7g064000 Brassica oleracea Bo7g064000 I 0.800
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.796
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.796
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.795
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.794
OS03G0818800 Oryza sativa OS03G0818800 I 0.791
Cla020549 Citrullus lanatus Cla020549 I 0.789
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.784
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.783
Cla018549 Citrullus lanatus Cla018549 I 0.778
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.712
Si006371m.g Setaria italica Si006371m.g I 0.702
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.699
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.685