Solyc10g084340.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc10g084340.1 T005532_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.856 0.949
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.843 0.960
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.837 0.949
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.813 0.848
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g084340.1.1 AP2 134 184
Solyc10g084340.1.1 AP2 226 277

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_32962 Aegilops tauschii F775_32962 I 0.869
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.860
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.804
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.840
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.860
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.835
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.807
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.856
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.837
TOE3 Arabidopsis thaliana AT5G67180 I 0.807
AP2 Arabidopsis thaliana AT4G36920 I 0.856
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.807
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.856
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.846
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.869
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.836
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.805
Bo7g064000 Brassica oleracea Bo7g064000 I 0.800
Bo1g004960 Brassica oleracea Bo1g004960 I 0.856
Bo4g070350 Brassica oleracea Bo4g070350 I 0.835
Bo7g118400 Brassica oleracea Bo7g118400 I 0.856
Bra011741 Brassica rapa Bra011741 I 0.856
Bra017809 Brassica rapa Bra017809 I 0.856
Bra011939 Brassica rapa Bra011939 I 0.835
Bra012139 Brassica rapa Bra012139 I 0.800
PK07183.1 Cannabis sativa PK07183.1 I 0.861
PK02403.1 Cannabis sativa PK02403.1 I 0.857
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.837
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.806
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.856
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.806
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.856
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.837
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.857
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.839
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.794
Ca_09295 Cicer arietinum Ca_09295 I 0.856
Ca_14618 Cicer arietinum Ca_14618 I 0.839
Ca_12010 Cicer arietinum Ca_12010 I 0.842
Ca_02499 Cicer arietinum Ca_02499 I 0.862
Cla018549 Citrullus lanatus Cla018549 I 0.778
Cla018124 Citrullus lanatus Cla018124 I 0.853
Cla020549 Citrullus lanatus Cla020549 I 0.789
Cla000716 Citrullus lanatus Cla000716 I 0.857
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.784
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.823
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.855
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.818
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.860
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.823
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.818
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.783
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.857
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.853
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.843
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.859
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.824
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.841
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.862
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.837
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.712
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.816
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.841
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.802
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.802
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.857
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.834
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.862
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.860
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.859
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.860
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.857
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.857
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.837
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.837
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.856
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.854
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.843
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.860
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.857
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.869
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.837
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.804
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.831
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.796
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.819
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.846
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.835
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.828
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.846
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.835
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.844
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.818
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.795
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.809
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.859
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.840
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.860
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.853
MDP0000200319 Malus domestica MDP0000200319 I 0.862
MDP0000181606 Malus domestica MDP0000181606 I 0.855
MDP0000163645 Malus domestica MDP0000163645 I 0.817
MDP0000137561 Malus domestica MDP0000137561 I 0.840
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.860
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.847
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.860
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.812
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.843
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.856
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.835
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.842
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.857
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.859
mgf021945m Mimulus guttatus mgf021945m I 0.866
mgf005133m Mimulus guttatus mgf005133m I 0.822
mgf009315m Mimulus guttatus mgf009315m I 0.857
mgf010466m Mimulus guttatus mgf010466m I 0.822
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.829
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.851
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.817
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.863
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.823
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.838
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.848
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.841
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.843
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.831
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.861
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.840
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.859
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.857
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.858
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.857
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.829
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.830
OBART07G08110 Oryza barthii OBART07G08110 I 0.838
OB06G29960 Oryza brachyantha OB06G29960 I 0.835
OB03G45870 Oryza brachyantha OB03G45870 I 0.827
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.860
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.838
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.847
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.847
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.835
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.838
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.835
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.847
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.860
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.835
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.838
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.835
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.796
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.838
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.835
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.838
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.847
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.835
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.838
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.835
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.835
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.847
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.836
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.847
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.835
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.860
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.838
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.847
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.835
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.838
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.835
OS03G0818800 Oryza sativa OS03G0818800 I 0.791
OS05G0121600 Oryza sativa OS05G0121600 I 0.860
OS07G0235800 Oryza sativa OS07G0235800 I 0.838
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.834
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.860
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.834
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.804
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.834
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.821
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.860
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.813
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.843
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.856
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.860
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.828
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.857
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.855
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.849
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.685
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.861
Pm002492 Prunus mume Pm002492 I 0.860
Pm000974 Prunus mume Pm000974 I 0.855
Pm030172 Prunus mume Pm030172 I 0.841
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.841
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.860
29805.m001494 Ricinus communis 29805.m001494 I 0.860
29169.m000017 Ricinus communis 29169.m000017 I 0.847
28752.m000339 Ricinus communis 28752.m000339 I 0.861
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.854
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.834
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.861
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.857
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.836
Si029636m.g Setaria italica Si029636m.g I 0.834
Si006371m.g Setaria italica Si006371m.g I 0.702
Si012635m.g Setaria italica Si012635m.g I 0.847
Si025305m.g Setaria italica Si025305m.g I 0.860
Si036068m.g Setaria italica Si036068m.g I 0.834
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.851
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.857
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.856
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.819
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.857
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.855
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.844
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.860
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.855
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.863
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.834
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.834
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.847
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.810
TCM_000665 Theobroma cacao TCM_000665 I 0.854
TCM_042000 Theobroma cacao TCM_042000 I 0.869
TCM_022077 Theobroma cacao TCM_022077 I 0.861
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.699
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.869
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.869
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.869
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.860
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.839
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.857
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.860
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.802
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.834
P93632_MAIZE Zea mays P93632_MAIZE D 0.813
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.813
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.855
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.834
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.847