CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g072600.1
(
Solanum lycopersicum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Solyc11g072600.1
T005544_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.689
0.875
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.689
0.875
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g072600.1.1
AP2
159
208
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
Solyc11g072600.1.1
AP2
251
283
SKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIK
Links
Other
AP2
family TFs
Other
Solanum lycopersicum
TFs
181 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy