Solyc12g056430.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc12g056430.1 T005556_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1E
M00963_2.00 		Arabidopsis thaliana
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_thaliana 		0.684 0.680
DREB1E
M06589_2.00 		Arabidopsis thaliana
NNNYYGYCGACATVD
HBATGTCGRCRRNNN		 Dap-seq
OMalley et al.(2016)
DDF2_col_a 		0.684 0.680
DREB1E
M09702_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_03 		0.684 0.680
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc12g056430.1.1 AP2 42 93

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.776
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.758
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.743
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.725
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.720
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.716
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.715
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.713
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.712
Ca_04504 Cicer arietinum Ca_04504 I 0.708
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.706
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.706
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.706
Pm023777 Prunus mume Pm023777 N 0.699
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.697
Cla011674 Citrullus lanatus Cla011674 I 0.695
mgf017136m Mimulus guttatus mgf017136m I 0.694
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.692
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.692
Pm023775 Prunus mume Pm023775 I 0.690
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.690
30190.m011120 Ricinus communis 30190.m011120 I 0.689
MDP0000154764 Malus domestica MDP0000154764 I 0.689
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.688
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.688
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.688
mgf019061m Mimulus guttatus mgf019061m I 0.688
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.687
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.686
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.684
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.684
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.684
DREB1E Arabidopsis thaliana AT1G63030 D 0.684
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.684
mgf018934m Mimulus guttatus mgf018934m I 0.682
mgf022408m Mimulus guttatus mgf022408m I 0.682
mgf018631m Mimulus guttatus mgf018631m I 0.682
mgf016974m Mimulus guttatus mgf016974m I 0.682
MDP0000198054 Malus domestica MDP0000198054 I 0.681
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.681
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.680
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.680
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.679
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.678
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.678