TCM_014471 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_014471 T005592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.703 0.706
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.703 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY22247 AP2 88 139

Links

Other AP2 family TFs
Other Theobroma cacao TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pm030235 Prunus mume Pm030235 I 0.808
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.797
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.794
MDP0000197375 Malus domestica MDP0000197375 I 0.793
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.793
MDP0000157628 Malus domestica MDP0000157628 I 0.793
30174.m009031 Ricinus communis 30174.m009031 I 0.784
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.777
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.768
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.767
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.767
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.765
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.765
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.764
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.759
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.759
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.759
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.748
MTR_4g111915 Medicago truncatula MTR_4g111915 N 0.746
MTR_4g112490 Medicago truncatula MTR_4g112490 N 0.746
PK28640.1 Cannabis sativa PK28640.1 I 0.742
Ca_06590 Cicer arietinum Ca_06590 N 0.738
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.735
PK25269.1 Cannabis sativa PK25269.1 I 0.735
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.730
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.728
Pm008788 Prunus mume Pm008788 I 0.728
MDP0000133476 Malus domestica MDP0000133476 I 0.728
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.728
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.728
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.728
TCM_005425 Theobroma cacao TCM_005425 I 0.728
mgf018851m Mimulus guttatus mgf018851m I 0.728
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.728
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.728
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.728
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.728
30174.m008961 Ricinus communis 30174.m008961 I 0.728
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.728
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.728
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.728
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.728
MDP0000138669 Malus domestica MDP0000138669 I 0.728
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.727
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.726
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.726
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.726
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.726
TCM_011632 Theobroma cacao TCM_011632 I 0.726
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.724
Pm015931 Prunus mume Pm015931 I 0.724
F775_02727 Aegilops tauschii F775_02727 I 0.724
Si038848m.g Setaria italica Si038848m.g I 0.724
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.724
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.724
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.724
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.724
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.724
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.724
Si024417m.g Setaria italica Si024417m.g I 0.724
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.724
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.724
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.724
Cla010474 Citrullus lanatus Cla010474 I 0.724
Ca_10494 Cicer arietinum Ca_10494 I 0.724
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.724
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.724
PK13330.1 Cannabis sativa PK13330.1 I 0.724
29635.m000461 Ricinus communis 29635.m000461 I 0.724
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.724
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.724
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.724
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.724
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.724
TCM_018659 Theobroma cacao TCM_018659 I 0.724
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.724
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.724
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.724
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.724
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.724
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.724
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.724
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.724
MDP0000551969 Malus domestica MDP0000551969 I 0.724
OBART12G17080 Oryza barthii OBART12G17080 I 0.724
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.724
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.724
MDP0000276536 Malus domestica MDP0000276536 I 0.724
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.724
OS12G0582900 Oryza sativa OS12G0582900 I 0.724
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.724
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.724
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.724
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.724
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.724
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.724
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.724
Si032213m.g Setaria italica Si032213m.g I 0.723
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.723
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.722
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.722
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.722
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.722
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.722
29813.m001543 Ricinus communis 29813.m001543 I 0.722
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.720
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.719
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.719
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.719
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.719
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.718
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.718
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.717
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.717
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.717
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.717
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.716
Gorai.001G064900 Gossypium raimondii Gorai.001G064900 N 0.715
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.715
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.715
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.714
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.713
Ca_16397 Cicer arietinum Ca_16397 I 0.713
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.713
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.713
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.713
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.712
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.712
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.711
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.709
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.708
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.708
Ca_25424 Cicer arietinum Ca_25424 I 0.708
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.706
Ca_00417 Cicer arietinum Ca_00417 I 0.706
mgf022665m Mimulus guttatus mgf022665m I 0.706
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.704
MDP0000177547 Malus domestica MDP0000177547 I 0.703
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.703
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.703
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.703
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.703
OS07G0204000 Oryza sativa OS07G0204000 I 0.703
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.703
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.703
OBART07G06690 Oryza barthii OBART07G06690 I 0.703
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.703
OB07G15030 Oryza brachyantha OB07G15030 I 0.703
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.703
Bo2g018360 Brassica oleracea Bo2g018360 I 0.703
Bo3g013830 Brassica oleracea Bo3g013830 I 0.703
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.703
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.703
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.703
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.703
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.703
Bo9g152440 Brassica oleracea Bo9g152440 I 0.703
Bra002262 Brassica rapa Bra002262 I 0.703
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.703
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.703
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.703
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.703
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.703
Bra006518 Brassica rapa Bra006518 I 0.703
Bra020063 Brassica rapa Bra020063 I 0.703
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.703
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.703
TCM_040015 Theobroma cacao TCM_040015 I 0.703
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.703
Ca_08232 Cicer arietinum Ca_08232 I 0.703
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.703
Si033237m.g Setaria italica Si033237m.g I 0.703
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.703
TCM_025913 Theobroma cacao TCM_025913 I 0.703
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.703
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.703
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.703
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.703
Pm025326 Prunus mume Pm025326 I 0.703
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.703
30084.m000185 Ricinus communis 30084.m000185 I 0.703
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.703
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.703
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.703
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.702
Cla021590 Citrullus lanatus Cla021590 I 0.702
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.702
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.702
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.702
Cla019296 Citrullus lanatus Cla019296 N 0.700
Cucsa.198700 Cucumis sativus Cucsa.198700 N 0.700
OB09G23520 Oryza brachyantha OB09G23520 I 0.696
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.696
Pm000004 Prunus mume Pm000004 I 0.692
MDP0000525933 Malus domestica MDP0000525933 I 0.692
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.692
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.692
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.691
F775_04303 Aegilops tauschii F775_04303 I 0.691
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.691
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.690
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.690
Cla012318 Citrullus lanatus Cla012318 I 0.690
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.690
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.690
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.690
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.689
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.689
TCM_015579 Theobroma cacao TCM_015579 I 0.689
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.689
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.689
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.688
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.686
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.686
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.686
mgf023693m Mimulus guttatus mgf023693m I 0.685
mgf022810m Mimulus guttatus mgf022810m I 0.685
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.684
30068.m002623 Ricinus communis 30068.m002623 I 0.682
evm.TU.supercontig_13.83 Carica papaya evm.TU.supercontig_13.83 N 0.680
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.677