Traes_6DL_DD82BD107 (Triticum aestivum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Traes_6DL_DD82BD107 T005938_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EREBP1
M09708_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EREBP1_01
0.789 0.918
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.782 0.878
Q2TN80_WHEAT
M09715_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_02
0.766 0.878
RAP2-12
M01046_2.00
Arabidopsis thaliana
RSMGBMNNNN

NNNNKVCKSY
PBM
Sullivan et al.(2014)
pTH7359
0.765 0.796
RAP2-12
M06588_2.00
Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN

NDNNNDHDDYGGCGGCGGHDN
Dap-seq
OMalley et al.(2016)
RAP212_col_a
0.765 0.796
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.744 0.776
HRE1
M06595_2.00
Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN

NDDHDRYGGCGGCGGHKVNDN
Dap-seq
OMalley et al.(2016)
ERF73_col_a
0.740 0.796
HRE1
M06596_2.00
Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY

RYGGCGGCGGHGRNDKHDRND
Dap-seq
OMalley et al.(2016)
ERF73_colamp_a
0.740 0.796
0100010458
M01644_2.00
Ostreococcus tauri
MGCCGSCR

YGSCGGCK
PBM
Weirauch et al.(2014)
pTH9447
0.729 0.714
RAP2-3
M01050_2.00
Arabidopsis thaliana
CGCCGCCR

YGGCGGCG
PBM
Sullivan et al.(2014)
pTH8811
0.712 0.776
RAP2-3
M00847_2.00
Arabidopsis thaliana
NMGCCGCCDN

NHGGCGGCKN
PBM
Franco-Zorrilla et al.(2014)
RAP2.3
0.712 0.776
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.702 0.673
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.700 0.673
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.698 0.633
ERF091
M06638_2.00
Arabidopsis thaliana
NNHNYHDCCGCCGCCRY

RYGGCGGCGGHDRNDNN
Dap-seq
OMalley et al.(2016)
AT4G18450_col_a
0.693 0.714
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.689 0.714
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN

NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.678 0.673
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND

HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.678 0.673
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR

YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.678 0.673
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.678 0.673
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.678 0.673
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6DL_DD82BD107.2 AP2 131 182

Links

Other AP2 family TFs
Other Triticum aestivum TFs

751 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASU_02713 Ascaris suum ASU_02713 N 0.000
Bm3681 Brugia malayi Bm3681 N 0.000
CBG10736 Caenorhabditis briggsae CBG10736 N 0.000
CBN24068 Caenorhabditis brenneri CBN24068 N 0.000
CBN31083 Caenorhabditis brenneri CBN31083 N 0.000
CJA12606 Caenorhabditis japonica CJA12606 N 0.000
CRE10982 Caenorhabditis remanei CRE10982 N 0.000
D917_10103 Trichinella nativa D917_10103 N 0.000
DICVIV_05785 Dictyocaulus viviparus DICVIV_05785 N 0.000
EFV59106 Trichinella spiralis EFV59106 N 0.000
EVEC_0000655901 Enterobius vermicularis EVEC_0000655901 N 0.000
HPLM_0000501901 Haemonchus placei HPLM_0000501901 N 0.000
L596_g23719 Steinernema carpocapsae L596_g23719 N 0.000
L889_g29456 Steinernema feltiae L889_g29456 N 0.000
L892_g21703 Steinernema scapterisci L892_g21703 N 0.000
L893_g27223 Steinernema glaseri L893_g27223 N 0.000
L898_g6841 Steinernema monticolum L898_g6841 N 0.000
LOAG_17507 Loa loa LOAG_17507 N 0.000
nDi.2.2.2.g01416 Dirofilaria immitis nDi.2.2.2.g01416 N 0.000
nRc.2.0.1.g22459 Romanomermis culicivorax nRc.2.0.1.g22459 N 0.000
PTRK_0001785400 Parastrongyloides trichosuri PTRK_0001785400 N 0.000
SBAD_0000454101 Soboliphyme baturini SBAD_0000454101 N 0.000
SMUV_0000904801 Syphacia muris SMUV_0000904801 N 0.000
SPAL_0000385600 Strongyloides papillosus SPAL_0000385600 N 0.000
SSTP_0000865200 Strongyloides stercoralis SSTP_0000865200 N 0.000
SVE_1904900 Strongyloides venezuelensis SVE_1904900 N 0.000
TMUE_s0010015900 Trichuris muris TMUE_s0010015900 N 0.000
TTRE_0000009201 Trichuris trichiura TTRE_0000009201 N 0.000
WBGene00241636 Onchocerca volvulus WBGene00241636 N 0.000
YQE_00812 Dendroctonus ponderosae YQE_00812 N 0.000
YQE_04155 Dendroctonus ponderosae YQE_04155 N 0.000
zag-1 Caenorhabditis elegans WBGene00006970 N 0.000